Bos indicus (zebu cattle): 109568652
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Entry
109568652 CDS
T04792
Symbol
COL22A1
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-1(XXII) chain
KO
K16630
collagen type XXII alpha
Organism
biu
Bos indicus (zebu cattle)
Pathway
biu04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
109568652 (COL22A1)
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Gene cluster
GFIT
Motif
Pfam:
Collagen
VWA
VWA_2
Laminin_G_3
Laminin_G_2
Motif
Other DBs
NCBI-GeneID:
109568652
NCBI-ProteinID:
XP_019829630
UniProt:
A0A6P5CV85
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Position
14:3500607..3715519
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AA seq
1627 aa
AA seq
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MLVPKHERAMGHLRGSVVAGLLWMLLLWSGDRGCQAQRAGCKTVHYDLVFVLDSSSSVGK
ENFEKVRQWVANLVDTFEVGPERTRVGVVRYSDRPATAFELGRFGSRAAVRAAARQLAYH
GGHTHTGDALRFITRHSFTPRAGGRPGDRAFKQVAILLTDGRSQDLVLPAATAARRAGIR
IFAVGVGEALREELEEIASEPTAAHVFHVSDFDAIDKIRGKLRRRLCENVLCPSVRVEGD
RFKHTNGGTKEITGFDLMDLFSVKTLLGERENGAQSSYVRMGSFPVVQRTEDVFPQGLPD
EYAFVTTFRLRKXSRREDWYIWQVIDQYGIPQVSIRLDGENKAVEYSAVGAMKDAVRVVF
RGPRVHDLFDRDWHKVALSVQAQNASLYVDCALVQTLPLEERENIDIQGKTAIGKRLYDS
VPVDFDLQRVVIYCDSRHAELETCCDIPSGPCQVTVLTEPSPLPQPPPTSGSEQIGFLKT
INCSCPPGEKGEKGFDGPVGLPGPKGDMGATGXAGAPGPKGEKGDTGGGPFVQGEKGEKG
SLGLPGPPGRDGSKGMRGEPGEPGEPGLPGEVGLRGSQGXPGLPGPPGPIGAPGLHGEQG
EKGARGEKGEQGLDGFPGKQGETGEQGRPGPPGEPGPQGEKGAVGPAGPPGLPGSVVQRE
GLKGEQGAPGPRGHQGPPGPPGAPGLMGPEGKDGPPGLQGLRGKRGEAGPPGVPGLLGQQ
GPPGPPGVPGPPGPGGPPGLPGEIGFPGKPGPPGQAGPPGKDGPNGPPGLPGPKGDPGDR
GEDGLPGQRGPRGEVGEQGLAGRPGEKGEAGLPGFPGLPGARGEKGDQGEKGALGLPGLK
GDQGVKGEVGPPGPPGLPGTTSLFTPHPRMPGEPGPRGEKGDPGVPGEPGSPGHPGELGP
RGPTGPPGAKGQEGAQGAPGASGSPGVPGLVGPPGPSGPPGSVGPPGSRGPPGKDGERGE
KGAAGEEGSPGPAGPRGDPGSPGPPGPPGRGKDGDPGLRGPPGLPGPLGTKGDRGAPGIP
GSPGNRGEPGMAVAGPPGPSGPPGEKGPPGSRGPPGFPGPQGPAGQDGIPGNPGERGPPG
KPGPSSVLSPGDVNLLVKDVCNDCPPGPPGLPGLPGFKGDKGLPGKPGREGTEGKKGDAG
PRGLPGPPGIAGPQGNKGEHGADGEVGQKGDQGHPGVPGFMGPPGDPGPPGADGIAGTAG
PPGIQGPPGKEGPPGPQGPSGLPGIPGEEGKEGRDGKPGPPGEPGKTGEPGLPGPEGARG
PPGFKGHTGDSGPPGPRGEPGATGPPGREGSPGKDGDTGPTGPQGPQGLRGLPGKSGSPG
SPGEPGTPGSPGQKGTKGENGSPGLPGFLGPRGPQGEPGEKGVPGKEGAPGKPGEPGLRG
ERGDPGIKGDKGPPGGKGQPGDPGTPGHKGHTGLMGPQGPPGESGPAGPPGPPGQPGFPG
LRGESPSMDILRRLIQEELEKQLETKLAYLLAQMPSAHTKXSQGRPGPPGPPGKDGLPGR
AGPVGEPGRPGQGGLEGPSGPIGPKGERGAKGDPGAPGVGLRGEMGPPGIPGQPGEPGYA
KDGLPGSPGPQGETGPAGHPGPPGPPGPPGQCDPSQCAYFASLAAARPGNVKGPXKMPGC
QETLVDF
NT seq
4884 nt
NT seq
+upstream
nt +downstream
nt
atgctggttcccaagcacgagagagccatgggccacctgagagggagcgtcgtggccggc
ctcctgtggatgctgctgctttggagcggggaccgcggctgtcaggcccagagggcaggt
tgcaaaactgtccactatgacctggtgttcgtgctggactcctcctcgagcgtgggcaaa
gagaacttcgagaaggtccggcagtgggtggccaacctggtggacacgttcgaggtgggc
ccggagcgcacgcgggtgggcgtggtgcgctacagcgaccgcccrgccacagccttcgag
ctgggccgcttcggctcgcgggctgcggtgcgcgcggcggcrcggcagctggcctaccac
ggcggccacacgcacacgggcgacgcgctgcgcttcatcacacgccacagcttcacgcca
cgagccggcggccgccccggggaccgcgccttcaagcaggtggccatcctgctgaccgac
ggccgcagccaggacctggtgctgcccgctgccacggccgcgcgycgygctggcatccgc
atctttgccgtgggcgtgggcgaggcgctgcgygaggagctagaggagatcgcctccgag
cccacagcggcgcacgtctttcacgtgtctgacttcgacgccatcgacaagatccggggc
aagctgcggcgccgcctgtgcgagaatgtgctctgccccagcgttcgtgtggaaggagat
cgctttaagcacaccaatggcggaaccaaggagatcacaggttttgacctgatggatttg
ttcagtgtgaagacgctcttgggggagagagagaacggggcgcagagctcctacgtccgg
atgggatccttccctgtggtgcagaggacggaggacgtgttcccgcaaggtttgcccgat
gagtacgcctttgtcaccaccttccggctcaggaaaycatcccggagagaagactggtat
atctggcaggtcatcgaccagtacggcatcccgcaggtgtccatccgcctggatggcgag
aacaaggccgtggagtacagcgctgtgggcgccatgaaggatgccgtcagggtggtcttc
cggggcccccgggtccacgacctcttcgaccgggactggcacaaggtggccctgagcgtg
caggcccagaacgcttccttgtacgtcgactgtgcactggtgcagacgctgcccctcgag
gagcgggagaacatcgacatccagggcaagacggcgatcggcaagcgcctctacgacagc
gtgcccgtcgactttgacctccagcgggtcgtgatttactgcgactcccgacacgcggaa
ctggagacctgctgtgacatcccctcgggtccgtgtcaggtgaccgtgctgacggaaccc
tccccgctgccccagccgcctcccacctccggcagtgagcagatcgggtttttgaagacc
atcaactgctcctgcccacctggagaaaagggtgagaagggcttcgatggccccgtggga
ctccccggcccaaagggagacatgggagccactgggycagcaggcgctcctggacccaag
ggagagaaaggagatacgggcggaggaccttttgtgcaaggagaaaagggtgaaaagggc
tccttgggcctgccgggtcccccaggaagagacggcagcaaaggcatgcggggggagcca
ggagaaccgggcgagccggggctgcccggggaggtgggcctgcggggatcccagggacsg
cctggacttccaggacctcccggccccatcggtgctcccggtctccatggagaacaaggg
gaaaagggagcccggggagaaaagggggagcaaggcctggatggattccccgggaagcag
ggggagactggtgagcagggaagacccggccctcccggtgagccagggccccagggggag
aagggtgccgtgggtcctgcaggcccccctgggcttccaggctctgtggtgcagagagag
ggcctgaaaggcgagcagggagcccccggacctcggggtcaccagggcccacctgggcca
ccaggcgccccgggtctgatgggtccagaaggcaaggatggacctcctggtttgcaaggt
ctccgaggaaagagaggtgaggcgggtcctcctggagtccctggcttgctggggcagcag
ggccccccaggaccacctggcgtcccaggcccccctggacccggaggccccccgggtctg
cctggagagatcggcttcccgggaaagcctgggccccctgggcaggcgggaccgcctgga
aaggatgggccgaatggacccccaggcctgccaggacccaagggagacccaggagacaga
ggggaggacggtctgcccggacagcgcggcccgcggggtgaagttggggagcagggcctg
gctggccgacctggagaaaagggagaggcagggctcccaggcttcccgggactcccaggt
gcgaggggagagaaaggcgaccagggagagaaaggtgccctggggcttccgggactgaaa
ggcgaccaaggtgtaaagggggaagtgggcccaccagggccccctggattacctggcact
acttccctgttcacaccacacccgagaatgcccggagaaccagggcccaggggagagaag
ggcgatcctggcgtgcctggggagccggggtcgccaggtcatcctggagaactggggcct
cggggacccactggaccaccgggcgccaagggacaagaaggcgcccagggagcgcctgga
gcatccgggagccccggagttcctggacttgtagggccccctggccccagcggcccccca
gggagcgtgggtcccccrggctccagaggcccccctgggaaagatggggagcgtggtgag
aagggagcagcaggagaagaagggagcccagggccagccggccccaggggcgatcctggt
tcccccgggccccccgggccccctggaagagggaaagatggagacccgggacttcgtggc
ccacctggattgccaggacctctgggaaccaagggggaccgtggtgcgcctgggatcccc
ggctctcctggcaaccgtggagagccaggcatggcggtcgccggccctccgggcccctct
ggaccaccaggagaaaaaggtcctccgggatctcgaggcccgcctgggtttcccggcccc
cagggaccagctggccaggatggtataccaggaaatccaggagaaagagggcctcctggc
aaaccaggcccctcttcagtactgtctccaggggacgtaaatctcttggtgaaggacgtg
tgcaatgactgtcccccgggycccccaggcctccctggtcttccaggttttaaaggggac
aaaggtctcccaggaaagccagggagagaaggcacagaagggaaaaagggggatgctggg
cccagaggcctcccagggcccccaggaatagctggacctcagggaaataaaggagaacat
ggtgcagacggtgaggttggacagaaaggtgaccagggtcatcccggagttccyggtttc
atgggccccccaggggaccctggaccaccaggagcagacggaatagcgggaactgctgga
ccaccaggaatccaaggacccccagggaaagaaggtcctcctggcccccaaggcccgtct
ggattacccggcatcccaggagaagaaggcaaagagggcagagatggaaaaccagggccc
cccggagagccgggcaaaacaggagagccgggtctgccaggaccagagggtgcccgcggt
ccccctggcttcaagggacacacaggcgactctggcccacctggcccccggggagagcct
ggcgccacggggccccctggccgggargggtcaccagggaaagacggtgacacyggacct
acagggccacagggtccccaaggactgaggggcctaccgggtaagagtgggtcacctgga
tcaccgggagagcctggcaccccaggaagccctggccagaagggaaccaaaggagaaaac
ggcagcccagggctcccgggcttcctgggtccccgggggcctcagggggagccaggcgag
aaaggagtcccaggcaaggagggggcacctgggaagccaggagagccaggactcagagga
gaaaggggagatcctggcatcaaaggtgacaaaggccctcccggtggmaagggccagccc
ggcgaccccgggaccccaggccacaagggtcacacaggcctcatgggcccccaggggcca
cctggggagagcgggccggccggtcccccrgggcctccgggccagccaggatttccaggg
ctaaggggcgagtctccatccatggacatcctgcggcggctcatccaagaggaactggag
aaacagctggaaaccaaactcgcctacctcctggcccagatgccctctgcacacacgaag
scctctcaaggcagacccggacccccagggcctcctggaaaagatgggcttccaggtcgg
gcaggccccgtcggggagccaggaaggccagggcaagggggtctggagggaccctctggc
cccataggtcccaaaggtgagcgaggagccaaaggtgacccaggggcacctggagttggc
ctccgaggcgagatgggaccccccgggatcccaggtcagcccggggaacctggctatgct
aaagatgggcttcccgggagtcccgggcctcaaggagagacaggaccagctggacacccc
ggccccccaggtccccccggccccccgggccagtgcgacccctcacagtgtgcctacttc
gccagccttgctgctgctcgacctggtaacgtgaagggcccctaraagatgccgggatgc
caggagacgctggtggatttctga
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