Bos indicus (zebu cattle): 109569490
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Entry
109569490 CDS
T04792
Symbol
USP47
Name
(RefSeq) LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal hydrolase 47
KO
K11857
ubiquitin carboxyl-terminal hydrolase 47 [EC:
3.4.19.12
]
Organism
biu
Bos indicus (zebu cattle)
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
biu01002
]
109569490 (USP47)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
biu04121
]
109569490 (USP47)
Enzymes [BR:
biu01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
109569490 (USP47)
Peptidases and inhibitors [BR:
biu01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
109569490 (USP47)
Ubiquitin system [BR:
biu04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
109569490 (USP47)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP47_C
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
109569490
NCBI-ProteinID:
XP_019830405
UniProt:
A0A6P5CXH1
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All DBs
Position
15:complement(39791981..39897556)
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AA seq
1375 aa
AA seq
DB search
MVPGEENQLVPKEDVFWRCRQNIFDEMKKKFLQIENAAEEPRVLCIIQDTTNSKTVNERI
TLNLPASTPLRKLFEDVANKVGYINGTFDLVWGNGINTADMAPLDHTSDKSLLDANFEPG
KKNFLHLTDKDGEQPQILLEDSSAGDDSVHDKFIGPLPREGSVGSTSDYVSQSYSYSSIL
NKSETGYVGLVNQAMTCYLNSLLQTLFMTPEFRNALYKWEFEESEEDPVTSIPYQLQRLF
VLLQTSKKRAIETTDVTRSFGWDSSEAWQQHDVQELCRVMFDALEQKWKQTEQADLINEL
YQGKLKDYVRCLECGYEGWRIDTYLDIPLVIRPYGSSQAFASVEEALHAFIQPEILDGPN
QYFCERCKKKCDARKGLRFLHFPYLLTLQLKRFDFDYTTMHRIKLNDRMTFPEELDMSTF
IDVEDEKSPQTESCTDSGAENEGSCHSDQMSNDFSNDDGVDEGICLENNSGTEKIPKPGL
EKNSLIYELFSVMVHSGSAAGGHYYACIKSFSDEQWYSFNDQHVSRITQEDIKKTHGGSS
GSRGYYSSAFASSTNAYMLIYRLKDPARNAKFLEVDEYPEHIKNLVQRERELEEQEKRQR
EIERNTCKIKLFCLHPVKQVMMENKLEVHKDKTLKEAVEMAYKMMDLEEVIPMDCCRLVK
YDEFHDYLERSYEGEEDTPMGLLLGGVKSTYMFDLLLETRRPDQVFQSYKPGEVMVKVHV
VDLKAESVAAPITVRAYLNETVTEFKQLISKAVHLPAETMRVVLERCYNDLRLLTVPSKT
LKNEGFFRSNKVFVESSETLDYQMAFTDSHLWKLLDRHANTIRLFVLLPEQSPGSFSKRT
AYQKAGGDSGNVGDDCERVKGPAGSLKSVEAILEESTEKLKSLSLQQQQEGDNGDSSKST
ETSDFENIESPLNERGSSASVDNRELEQHMQTSDPENFQSEERSDSDVNNDRSTSSVDSD
ILSSSHSSDTLCNADNAQIPLANGLDSHSITSSRRTKANEGKKETWDTAEEDSGTDSEYD
ESGKSRGEIQYMYFKAEPYAADEGSGEGHKWLMVHVDKRITLATFKQHLEPFVGVLSSHF
KVFRVYASNQEFESVRLNETLSSFSDDNKITIRLGRALKKGEYRVKVYQLLVNEQEPCKF
LLDAVFAKGMTVRQSKEELIPQLREQCGLELSIDRFRLRKKTWKNPGTVFLDYHIYEEDI
NISSNWEVFLEVLDGVEKMKSMSQLAVLSRRWRPSEMKLDPFQEVVLESSSVDELRDKLY
EISGIPVEDIEFAKGRGTFPCDISVLDIHQDLDWNPKVSTLNVWPLYICDDGAVIFYRDR
REELMELTDEQRNELMXKESSRLQKTGHRVTYSPRKEKALKIYLDGAPNKDLTQD
NT seq
4128 nt
NT seq
+upstream
nt +downstream
nt
atggtgcccggcgaggagaaccaactggtcccgaaggaggatgtgttttggagatgcaga
caaaatatctttgatgaaatgaagaagaaatttttacagatagaaaatgctgctgaagaa
ccaagagtcttatgtataatacaagatactactaattcaaagacggtgaatgaacggatc
actttaaacttaccagcttctactccactcagaaagctctttgaagatgtggccaayaaa
gtaggctacataaatggaacctttgatttggtgtgggggaatggaatcaatactgctgat
atggctccactggatcatacyagtgataagtctcttcttgatgctaattttgagccagga
aagaagaactttctgcatttgacagataaagatggtgaacagcctcagatactgctggag
gattccagtgctggggatgacagtgttcatgacaaatttattggtccacttccaagagaa
ggttctgtgggctctaccagtgattatgtcagccaaagctactcctaytcatctattttg
aataaatcagaaactggataygtgggattagtaaaccaagcaatgacttgctatttgaat
agccttttgcaaacactttttatgactcctgaatttaggaatgcattatataagtgggaa
tttgaagaatctgaagaagatccagtgacaagtatcccataccaacttcagaggcttttt
gttttgttacaaaccagcaaaaagagagcaattgaaaccacagatgttacaaggagcttt
ggatgggatagtagtgaggcttggcagcagcatgatgtacaagaactgtgcagagtcatg
tttgatgctttggaacagaaatggaaacaaacagaacaggctgatcttataaatgaactg
taccaaggcaagctgaaggactacgtgagatgtctggaatgtggctatgagggttggaga
atcgacacataccttgatattccattggtcatccggccttatgggtccagccaggcgttt
gctagtgtggaagaagcattgcatgcatttattcagccagagatcctggatggcccaaat
caatatttttgtgaacgttgtaagaagaagtgtgatgcacgaaagggkcttcggtttttg
catttcccttatcttctgaccttacaattgaaaaggtttgattttgactatacaaccatg
cacaggattaaattgaatgatcggatgacrtttcctgaggaactagatatgagtacattt
attgatgttgaggatgagaagtctcctcagactgaaagttgcactgacagtggagccgaa
aatgaaggcagttgtcacagtgatcagatgagcaatgatttctccaatgacgacggcgtt
gatgaaggaatctgccttgaaaacaatagyggaactgaaaagattccaaaacctggactt
gagaagaattccttgatctatgagctcttctccgttatggttcattcagggagtgctgct
ggtggccattattatgcttgcataaagtctttcagtgatgagcaatggtacagcttcaat
gatcaacatgtcagcaggataacacaagaggacattaagaaaacacacggtggatcttca
ggaagcagaggatattactccagtgcttttgcaagctccacaaatgcatatatgctgata
tatagattgaaggacccagcaagaaatgcaaaatttctagaagtagatgagtatccagaa
catattaaaaacttggtgcagagagagagagaattggaagaacaagaaaagaggcaacga
gaaattgagcgcaatacatgcaagataaaattattctgtttgcatcctgtgaaacaagtg
atgatggaaaataaattggaggttcataaggataagacactaaaggaagcagtagaaatg
gcttataagatgatggatttagaagaggtaatacccatggattgctgtcgtcttgttaaa
tatgacgagtttcatgattatcttgaacgatcatatgaaggagaagaagatactccaatg
ggtcttttactaggtggagtcaagtcaacatacatgtttgatctgctgttggagacaaga
agacctgatcaagttttccagtcttataaacctggagaagtaatggtgaaagttcatgtt
gttgatctaaaggcagaatctgtagctgctcctatcactgttcgagcttacttaaatgaa
acagttacagaattcaaacagcttatatcaaaggccgtccatttacctgctgagacaatg
agagtagtgctggagcgctgctacaatgacttgcgccttctcactgtgcccagtaaaacc
ctgaaaaaygaagggttttttagaagtaataaggtgtttgttgaaagctctgagactctg
gattaccagatggcctttacagactctcatttatggaaactcctggatcggcatgcaaat
acaatcagattatttgttttgctacctgaacaatctccaggatctttttccaaaaggaca
gcataccagaaagctgggggtgactctgggaacgtgggtgatgactgtgaaagagtcaaa
ggacctgcagggagcctaaagtctgtggaagctattctagaagaaagcactgaaaaactc
aaaagcttgtcactgcagcagcagcaggagggagataatggggacagcagcaagagtact
gagacaagtgactttgaaaacattgaatcacctctcaatgagaggggctcctcagcctca
gtggataatagagaacttgaacagcatatgcagacttctgatcctgaaaattttcagtct
gaagagcgatcagattcagatgtgaataatgataggagtacaagttcggtggacagtgat
attcttagctcgagtcatagcagtgatactttgtgcaatgcagataatgcccagatccct
ttggctaatggacttgactctcacagcatcacgagtagtagaagaactaaagcgaacgaa
gggaaaaaggagacatgggatacagcagaagaagactctggaacggacagtgaatatgat
gagagtggcaagagtaggggagaaatacagtacatgtatttcaaagcagagccctatgct
gcagatgaaggttctggggaaggacataaatggttgatggtgcatgttgacaaaagaatt
actctggccactttcaaacaacatttagagccctttgttggagttctgtcctctcacttc
aaggtctttcgcgtgtacgccagcaatcaagagtttgagagcgtccggctgaatgagaca
ctttcatcgttttcagatgacaataagattacaattagactgggaagagcacttaaaaaa
ggagaatacagagttaaagtgtaccagcttctagtcaatgaacaagagccatgcaagttt
ctgctagacgctgtttttgctaaaggaatgactgtacggcaatcaaaagaggagttaatt
cctcagctcagggagcagtgtggtttagagctcagtattgacaggtttcgtctaaggaaa
aaaacatggaagaatcctggcactgtctttttggattatcatatttatgaagaagatatt
aatatttccagcaactgggaggttttccttgaagttcttgatggggtggagaagatgaaa
tccatgtcacaacttgcagttttgtcaagacggtggaggccttcagagatgaagttggat
cccttccaggaggttgtgttggaaagcagtagtgttgatgagttgcgagataagctttat
gaaatcagtggaattcctgtagaagatattgagtttgccaagggtagaggaacttttccc
tgtgatatttctgtcctggatattcatcaggatttggactggaatcccaaagtttctacc
ctgaatgtctggcctctttatatctgtgatgatggtgcagtcatattttatagggataga
agagaagaattaatggagttgacagacgagcagagaaatgaactgatgnaaaaagaaagc
agtcgactccagaaaacaggacatcgtgtaacatactcacctcggaaagagaaagcacta
aaaatttatctggatggagcaccaaataaagatctaactcaagactga
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integrated database retrieval system
