Bos indicus (zebu cattle): 109578616
Help
Entry
109578616 CDS
T04792
Symbol
COPA
Name
(RefSeq) coatomer subunit alpha isoform X1
KO
K05236
coatomer subunit alpha
Organism
biu
Bos indicus (zebu cattle)
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
biu04131
]
109578616 (COPA)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
biu04147
]
109578616 (COPA)
Membrane trafficking [BR:
biu04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
109578616 (COPA)
Exosome [BR:
biu04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
109578616 (COPA)
Exosomal proteins of bladder cancer cells
109578616 (COPA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COPI_C
Coatomer_WDAD
WD40
ANAPC4_WD40
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
109578616
NCBI-ProteinID:
XP_019843564
UniProt:
A0A6P5DZT8
LinkDB
All DBs
Position
3:10322781..10367235
Genome browser
AA seq
1233 aa
AA seq
DB search
MLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWBYRMCTLIDKFDEHDGPVRGIDFH
KQQPLFXSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVW
NWQSRTCVCVLTGHNHYVMCAQFHPSEDLVXSASLDQTVRVWDISGLRKKNLSPGAVESD
VRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAW
EVDTCRGHYNNVSCAVFHPXQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAH
PNLNLFAAGHDGGMIVFKLERERPAYAVHGNMLHYVKDRFLXQLDFNSSKDVAVMQLRSG
SKFPVFSMSYNPAENAVLLCTRASNLENSTYDLYTIPKDADSQNPDAPEGKRSSGLTAVW
VARNRFAVLDRMHSLLIKNLKNEITKKVQVPNCDEIFYAGTGNLLLRDAESITLFDVQQK
RTLASVKISKVKYVIXSADMSHVALLAKHEHSCPMPLTAIVICNRKLEALCNIHENIRVK
SGAWDESGVFIYTTSNHIKYAVTTGDYGIIRTLDLPIYVTRVKGNNVYCLDRECRPRVLT
IDPTEFKFKLALINRKYDEVLHMVRNAKLVGQSIIAYLQKKGYPEVALHFVKDEKTRFSL
ALECGNIEIALEAAKALDDKNCWEKLGEVALLQGNHQIVEMCYQRTKNFDKLSFLYLITG
NLEKLRKMMKIAEIRKDMSGHYQNALYLGDVSEXVRILKNCGQKSLAYLTAATHGLDEEA
ESLKETFDPEKETIPDIDPNAKLLQPPAPIMPLDTNWPLLTVSKGFFEGSIASKGKGGAL
AADIDIDTVGTEGWGEDAELQLDEDGFVEATEGLGDDALGKGQEEGGGWDVEEDLELPPE
LDIPPGAAGGAEDGFFVPPTKGTSPTQIWCNNSQLPVDHILAGSFETAMRLLHDQVGVTQ
FGPYKQLFLQTYARGRTTYQALPCLPSMXGYPNRNWKDAGLKNGVPAVGLKLNDLIQRLQ
LCYQLTTVGKFEEAVEKFRSILLSXPLLVVDNKQEIAEAQQLITICREYIVGLSMETERK
KLPKETLEQQKRICEMAAYFTHSNLQPVHMILVLXTALNLFFKLKNFXTAAAFARRLLEL
GPKPEVAQQTRKILSACEKNPTDAYQLNYDMHNPFDICAASYRPIYRGKPVEKCPLSGAC
YSPEFKGQICKVTTVTEIGKDVIXLRISPLQFR
NT seq
3702 nt
NT seq
+upstream
nt +downstream
nt
atgctaaccaaatttgagaccaagagtgcgcgggttaaaggactcagctttcaccccaaa
agaccctggatcctgaccagtttacacaatggagtcatccagttatggractatcggatg
tgtaccctcattgacaagtttgatgagcatgatggtccagtacgaggcattgacttccat
aagcagcagccactgtttgyctctggaggagatgactataagattaaggtgtggaattac
aagcttcggcgctgtctcttcacattgcttgggcacttagactacatccgcactacattt
tttcatcatgaatacccttggattctgagtgcctcagatgatcagaccatccgagtgtgg
aattggcagtccagaacctgtgtctgtgtgttaacagggcacaatcattacgtcatgtgc
gctcagttccacccttcagaagacctggtcrtgtcagccagcctggaccagactgtgcgc
gtttgggatatttctggtctaaggaaaaaaaacctgtcccctggtgcagtggagtcggat
gtgagaggaattacgggggttgatctgtttggaactacggatgcagtggtgaagcatgta
ctagagggtcatgatcgtggagttaactgggctgcatttcaccctactatgccactcatt
gtatctggggcagatgaccgtcaagtgaagatctggcgtatgaatgaatcaaaagcatgg
gaagttgatacctgccgaggccattacaacaatgtatcttgtgctgtcttccaccctcst
caagagttgatcctcagcaattctgaggacaagagtatccgagtctgggacatgtctaag
cgcactggagttcagacattccgcagggaccatgatcgkttctgggtcttagctgcccac
cctaaccttaacctctttgcagcaggccatgatggtggcatgattgtatttaaactggaa
cgagaacggccagcctatgctgttcatggcaatatgctccattatgtcaaggaccgattc
ttaygtcagttggatttcaacagctccaaagacgtagctgtgatgcagttgcggagtggt
tccaagtttccagtgttcagtatgtcgtacaatccagcagaaaacgcagtcctactgtgt
acaagagccagcaatttagaaaatagtacctatgacttgtataccatccccaaggatgct
gactcccagaatcctgatgctcctgaagggaaacgatcctcaggcctgacagctgtttgg
gttgctcgaaatcggtttgctgtcctagatcggatgcattcgcttctgatcaagaatcta
aagaatgaratcaccaaaaaggtacaggtgcctaactgcgatgagattttttatgctggc
acaggcaacctcctgcttcgagatgcagaatccatcacgctctttgatgtacagcagaag
cggactctggcatctgtgaagatttccaaggtgaaatatgttatctsgtcagcagacatg
tcccatgtagcactactggccaaacatgagcactcatgtcctatgcctcttacagccatt
gtgatctgtaaccgcaaactggaggctctatgtaacattcatgagaacattcgtgtcaag
agtggggcctgggatgagagtggggtatttatctataccacaagcaaccacatcaaatat
gctgtcaccactggggactacgggatcatccgaactctggatttacctatctacgtcacg
cgggtgaagggcaacaatgtatattgcctggacagggagtgtcgtcctcgggtgctcacc
attgatcccactgagttcaagttcaaactggccctgatcaacagaaaatatgacgaggtg
ctacacatggtgagaaatgcgaaacttgtaggccagtctatcattgcttatcttcagaag
aagggatatcctgaagtggcactgcatttcgtcaaggatgaaaaaactcgctttagtctg
gcactggagtgtggaaacattgagattgctctggaagcagccaaagcactagatgacaag
aactgctgggaaaagctgggagaggtggccttactacaggggaaccaccagattgtggaa
atgtgttatcagcgcaccaaaaactttgacaaactttccttcttgtaccttatcactggc
aacctagagaaacttcgcaagatgatgaagattgctgagatacgaaaggacatgagtggc
cattatcagaatgccctttacctgggagatgtgtccgagcrggtgcggatcctgaagaac
tgtgggcagaagtcactggcctatctcacagctgctacccacggcttagacgaagaagct
gagagcctgaaggagacatttgacccagagaaggagacaatccccgacattgaccctaat
gccaagttgcttcagccacctgcaccyatcatgccgttggataccaactggcccttactg
actgtgtccaaaggsttcttygagggctccattgccagcaaggggaagggaggcgcrctg
gctgctgacattgacattgacactgttggtactgagggctggggagaggatgctgagctg
cagctggatgaagatgggtttgtagaggctacagaaggtttgggggatgatgctcttggc
aagggacaagaagaaggaggtggctgggatgtggaagaagatctggagcttcctcctgag
ctggatataccccctggggcagctgggggagctgaggatgggttctttgtgcccccaacc
aagggaaccagcccaactcagatctggtgtaataactctcagcttccagttgatcacatc
ctggccggctcttttgaaacagccatgcgactccttcacgaccaagtaggggtaacccag
tttggcccctacaagcaactgttcctgcagacctatgcccgaggccgcaccacctatcag
gctctgccctgcctgccctccatgwatggctatcctaatcgcaattggaaggatgcaggg
ctgaagaacggtgtaccagctgtgggcctgaagcttaatgacctcatccaacggttgcag
ctgtgctaccagctcaccacagttggcaagtttgaggaggctgtggaaaaattccggtcc
attttactcagcrtgccacttcttgttgtagacaataaacaagagattgcagaggctcag
cagcttatcaccatttgccgtgagtacattgtgggtttgtccatggagacagaaaggaag
aaactgcccaargaaactctagaacagcagaagcgcatctgtgagatggcagcctatttc
acccactcaaacctgcagccagtgcacatgatcctggtgttgcrtacagccctcaacctc
ttcttcaagctcaagaacttcargactgctgccgcctttgctcggcgcctgttggaactc
gggcccaagccggaggtggctcaacagacccgcaaaatcctgtctgcctgtgagaaaaac
cccacagatgcctatcagctcaattatgacatgcacaaccctttcgacatctgtgctgca
tcttatcggcccatctaccgtggaaagccagtggagaaatgtccgctcagtggggcctgc
tattcccctgagtttaagggtcagatctgcaaggtcactacggtgacagagattggcaaa
gacgtgatcrgtttgaggatcagccctctgcagtttcgctga
DBGET
integrated database retrieval system
