Brenneria izadpanahii: HC231_07440
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Entry
HC231_07440 CDS
T07407
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
biz
Brenneria izadpanahii
Pathway
biz01501
beta-Lactam resistance
biz01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
biz00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HC231_07440
01503 Cationic antimicrobial peptide (CAMP) resistance
HC231_07440
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
biz02000
]
HC231_07440
01504 Antimicrobial resistance genes [BR:
biz01504
]
HC231_07440
Transporters [BR:
biz02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
HC231_07440
Antimicrobial resistance genes [BR:
biz01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
HC231_07440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF
Patched
DUF4232
Motif
Other DBs
NCBI-ProteinID:
QTF07786
LinkDB
All DBs
Position
1673222..1676374
Genome browser
AA seq
1050 aa
AA seq
DB search
MFSRFFIYRPVFAWVISIVIMLAGALAIQSLSVAQYPDVAPPSVSITATYTGASAESLEN
SVTQIIEQQLTGLDGLLYFSSTSSSSGQAKITVTFKQGTNPDTAQVQVQNKVQQALSRLP
TEVQDQGVTVTKSQTSFLLIMSLYDTTDKASGSDISDYMVSNLQDPLARVDGVGDVKVFG
AQYAMRIWMDPTRLAAYDLMPSDISSAIEAQNTQVSAGKIGALPSRSDQQLTATVMAQSK
LTTPAQFKNIIVKSESNGSVVRLGDVAQVALGDESYDAVTRLNGHPAAGIAVMLSPGANA
LATAERVKAKVAEYESTMPDGYRVAYPKDSTDFIKISVEEVVKTLFEAILLVVIVMFLFL
QNLRATLIPTIAVPVVLLGTFGVLSLFGYSINTLTLFGMVLAIGLLVDDAIVVVENVERV
MRDDGLPPKAATEKSMREISGALVGVALVLSAVFLPMAFFGGSTGVIYRQFSITIVSSML
LSVLIALTLTPALCASLLKPTEHRTAKNGFFAAFNRRYQSMQERYSGKVAHVLHSPTRYI
ILYGLLIVGMALLFTRLPSGFLPTEDQGSVMVQFTLPPGATEARTSQVGKAIERYFLTDE
KDNTEAIFIISGFNFSGSGQNAGMAFVALKNWAQRPGAENSADAISKRATKALSSLRDAQ
VFTLTPPSVDGLGQSSGFTFELQATGTTDRDKLLQLRDELLASANKNAKLSAVRANDLAQ
MPQLQVDIDNDKASALGLSVSDVTATLSSAWGGSYVNDFIDRGRVKKVYIQGDEDSRSKP
EDLNKWFVRGTNSDGDSVMTPFSAFSSTRWVYGPESLSRYNGQASYEIQGSGASGVSSGV
AMDEMQALARALPKGTTYSWSGLSYQERLASGQALSLYAISILVVFLCLAALYESWSIPF
SVMLVIPLGVVGAVLAATLRGLENDVYFQVALLTTIGLSAKNAILIVEFAEAAYQRGATL
FAAALEGAVTRLRPVLMTSLAFIVGVFPLAISTGAGANSRISIGSGIVGGTLTATVLAVF
LVPMFFVLVRRMFPARADKALPGVDSSRKE
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atgttttcccgcttctttatttatcggccggtgtttgcctgggtgatctcgattgtgatc
atgctggcgggcgcgctggcgatccagtcgctttccgtggcgcaatatcctgatgtggcg
ccgccttcggtgtcaatcaccgcaacctataccggcgcgtcggcggaatcgctggaaaac
agcgttacccaaattattgaacaacagctcaccgggctggacgggctgctgtatttctcc
tctaccagcagttccagcggacaggcgaaaattaccgttacctttaagcagggaaccaac
cccgataccgcccaggttcaggtgcaaaataaggtgcagcaggcgttgagccgtttgccg
acggaagtgcaggatcaaggggttacggtaaccaagtcgcaaaccagcttcctgctgatt
atgtcgttgtacgatacgaccgataaagccagcggctcggatatctccgactatatggtc
agcaacctgcaggatccgctggcccgcgtggatggcgtgggggatgtcaaagtgttcggc
gcgcagtatgcgatgcgtatctggatggatcctacccgtctggccgcctacgatctgatg
ccgtcggatatttcctcggcgattgaggcgcaaaacacgcaggtatccgccggtaagatc
ggcgcgctgccttcccgcagcgatcagcagctcacggccacggtgatggcgcagtccaag
ttgacgacgcccgcacagttcaaaaatattattgtaaaaagcgaatctaatggttcggtt
gttcggctgggcgatgtcgcgcaggtggcgctgggcgatgaaagctacgatgccgtcact
cgcctgaacggccatccggcggcggggatcgccgtgatgctgtcgccgggggcgaacgcg
ctggcgacggcggaacgggtaaaggccaaagtcgccgagtatgaaagcaccatgcctgac
ggataccgcgttgcgtatccgaaagacagtacggactttattaaaatctccgtagaggaa
gtggttaaaacgttatttgaagccatcctgctggtggtgattgtcatgttcctgttccta
cagaatctgcgcgcgacgctgatcccgaccatcgccgtaccggtcgtactgctgggaacc
tttggcgtactgtcgctgtttggttattccatcaacacccttacgctatttggcatggtg
ctggcgatcgggctgctggtggatgacgcgatcgtggtggtggaaaacgtcgagcgcgtg
atgcgggatgacgggcttccgccgaaggccgccaccgaaaaatcgatgcgggagatttcc
ggcgcgttggtcggtgtggcgctggtgctgagcgcggtattcctgccgatggccttcttt
ggcggttcgaccggggtgatttaccgccagttctccatcactatcgtttcctccatgctg
ctgtcggtactgattgcgctgacgctgactccggcgctatgcgcttcattgttgaaacct
accgagcatcgcaccgcgaaaaacggcttttttgccgcttttaaccggcgctaccaatcc
atgcaggaacgttattccggcaaggtcgctcatgtattgcactctccgacgcgctacatc
atcctctatggcctgctgattgtcggcatggctttgctgtttacccgcctgccgtcgggg
ttcttgccgacggaagatcagggcagcgtgatggtgcagttcaccttaccgccaggcgcg
accgaagcgcggaccagccaggtgggtaaagcgattgaacgctattttctgaccgacgag
aaagacaataccgaagccattttcattatttccggatttaacttcagcggtagcggacaa
aacgccggcatggcgttcgtcgcgctgaaaaattgggcccagcgtccgggggcggaaaac
agcgcggatgcgatttcgaagcgggcgaccaaggcgctttcctcgctgcgagatgcgcag
gtgtttaccctgacgccgccgtcggtggatgggttgggccagtccagcgggtttaccttt
gaactgcaggcgacgggcaccaccgatcgcgacaaactgctgcaactgcgcgacgaactg
ctggcgtcggccaacaaaaacgccaaactgtcggccgttcgcgccaacgatttggcgcag
atgccccagctacaggtggatattgataatgacaaagccagtgcgctggggctgtcggtg
agcgatgtcaccgccacgctgagcagcgcctggggcggctcctatgtgaatgactttatc
gatcgcggacgggttaagaaggtttatatccagggggatgaagattcgcgcagcaaaccg
gaagatctgaataagtggttcgtgcgcggcaccaacagcgacggcgacagcgtgatgacg
ccgttctccgctttctcctcgacgcgctgggtctacgggccggaaagtctgtcgcgctat
aacggccaggcatcctatgaaattcagggttccggcgcttccggcgtcagttccggcgtc
gccatggatgaaatgcaggcgctggcaagagcgctgcctaaaggaaccacctattcctgg
agcgggctctcctatcaggaacggctggccagcgggcaggcgctttcgctgtatgcgatc
tcgattctggtggtgttcctatgtttggcggcgctgtatgaaagctggagtattccgttc
tcggtgatgctggtgatcccgctgggggtcgtcggcgccgtcttggccgccacgctgcgc
ggactggaaaatgacgtctatttccaggtggcgctgctcaccaccatcgggctgtcggcg
aaaaacgccatcctgattgtggagtttgccgaagcggcctatcagcgcggggccacgctg
tttgccgccgcgctggaaggcgccgtcacgcgtttaagaccggtgctgatgacctcgctg
gcctttatcgtcggggtattcccgctggcgatttccaccggcgcgggcgccaacagccgt
atttccatcggctccggcatcgtgggcggtacgctgacggcgaccgtattggcggttttt
ctggtgcctatgttctttgttttggtgagacgcatgtttcccgcgcgtgccgacaaagct
ctgcctggcgttgactcatcgaggaaagaataa
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