Bifidobacterium kashiwanohense PV20-2: AH68_00800
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Entry
AH68_00800 CDS
T03496
Name
(GenBank) recombinase RecR
KO
K06187
recombination protein RecR
Organism
bka
Bifidobacterium kashiwanohense PV20-2
Pathway
bka03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bka00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AH68_00800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bka03400
]
AH68_00800
DNA repair and recombination proteins [BR:
bka03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
AH68_00800
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
AH68_00800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Toprim_4
RecR_HhH
Toprim
RecR_C
RecR_ZnF
HHH_5
Toprim_2
HHH
Motif
Other DBs
NCBI-ProteinID:
AIZ13795
UniProt:
A0A0A7I3K8
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All DBs
Position
206451..207053
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AA seq
200 aa
AA seq
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MALAYDGAIQRLIDAFAHLPGIGPKGAQRIAFYLLNASDEEAQTLVDAITEVKEKIRFCD
ICGNVCETSPCPICADPRRDHSVICVVEEPKDVMSIERTREYRGLYHVLGGVINPMANVQ
PSDLNISKLIERLKDSEVTEVILALNPNVEGEATTSFLSQLLSQTDITVTRLASGLPVGG
DLEYADEITLGRALAGRRAV
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atggcactggcctatgacggcgccatccaacgactgatcgacgcattcgcgcacctgccc
ggcatcgggccgaaaggcgcgcaacgcatcgccttctacctgctcaacgcatccgacgag
gaagcgcagaccctggtcgacgccatcaccgaagtcaaggaaaaaatacgattctgcgac
atttgcggcaacgtgtgcgaaaccagcccatgcccgatctgcgccgatccgcgccgcgat
catagcgtgatctgcgtggtcgaagaaccgaaagacgtgatgagcatcgaacgcacgcgc
gaatatcgcggcctataccacgtgctcggtggcgtcatcaatccgatggccaacgtgcag
cccagcgacctcaacatctccaaactcatcgaacggctcaaagacagcgaagtcaccgaa
gtgattctcgcgctcaatccgaacgtggaaggcgaggcgaccaccagcttcctctcgcag
ctgctttcgcaaaccgacatcacagtcacgcgcttggcgagcggtctgccggtcggtggt
gacctcgaatatgccgacgaaatcacgctcggacgtgcgctggccgggcgtcgcgcggtt
tga
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