Blastococcus sp. PRF04-17: MVA48_19925
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Entry
MVA48_19925 CDS
T08406
Name
(GenBank) exonuclease SbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
blap
Blastococcus sp. PRF04-17
Brite
KEGG Orthology (KO) [BR:
blap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
blap03400
]
MVA48_19925
DNA repair and recombination proteins [BR:
blap03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MVA48_19925
Archaeal homologous recombinant proteins
MVA48_19925
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
FBPase_2
Motif
Other DBs
NCBI-ProteinID:
UOY01197
LinkDB
All DBs
Position
3920053..3921204
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AA seq
383 aa
AA seq
DB search
MRLLHTSDWHIGRSLHGTDLLAEQEVVLSGLAEVVQSESVDAVVVAGDVYDRAVPSADAT
GVLDRVIGRLLRAGAAVVMTPGNHDSARRLGTFSGLLSAAGLHVRASTRTLDEPVILSDD
HGDVAIYGLPFLEPEVARHELGLRDGARSHEAVLTAAMERVRADLFLRPGARSVVLAHAF
VGGGVASESERDICVGGVDLVPASVFDGVDYVALGHLHRPQSLSDRMRYSGSPLPYSFGE
AGHEKLAWLVDLDASGLAGVRPVPLPVPRPLTVLVGELADLLADPAHARFEEHFVSARLT
DAVRPADPMRRLQARFPHCVHLEWTGAAAVADGRSYQERMRGRSDLEVAGEFVAHVRGVP
PTAGERELLARALGAAARVEAAR
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgcggctcctgcacacctccgactggcacatcggcaggtccctgcacggcaccgacctg
ctcgccgagcaggaggtggtcctcagcggcctggccgaggtggtgcagtcggagtcggtc
gacgccgtggtcgtggccggcgacgtctacgaccgggccgttccctcggccgacgccacc
ggtgtgctcgaccgggtgatcggccggctgctcagggccggtgccgccgtcgtcatgacc
cccggcaaccacgactcggcccgtcgtctcggcaccttctcggggctgctgtccgcggcc
ggcctgcacgtccgggcctcgacccgcacgctcgacgagccggtgatcctgtccgacgac
cacggcgacgtcgcgatctacgggctgccgttcctggagccggaggtcgcccggcacgaa
ctgggcctcagggacggcgcccggagtcacgaggcggtgctgacggcggccatggagcgg
gtgcgggccgacctgttcctccggccgggggcccggtcggtggtgctcgcccacgcgttc
gtcggcggaggcgtggccagcgagagcgagcgcgacatctgcgtcggcggtgtcgacctg
gtgcccgcgtcggtgttcgacggcgtggactacgtcgccctcggccacctgcatcggccg
cagtcgctgtcggaccgcatgcgctacagcggctcgcccttgccctactccttcggcgag
gccgggcacgagaagctcgcctggctggtcgacctcgacgcgagcgggctggccggcgtc
cgccccgtccccctgccggtgccgcgaccgctgaccgtgctcgtcggcgagctggccgac
ctgctcgccgatcccgcgcacgcccggttcgaggagcacttcgtctccgcgcggctgacc
gacgcggtgcgcccggccgatccgatgcgccggctgcaggcacgcttcccgcactgcgtg
cacctggagtggaccggcgcggcggcggtcgccgacgggcgcagctaccaggagcgcatg
cgcggacgcagcgacctcgaggtggccggcgagttcgtcgcccacgtgcgcggcgtgccg
cccacggcgggggagcgggagctgctggcacgggccctcggggccgccgcccgggtcgag
gcggcacgatga
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