Blastomonas sp. RAC04: BSY18_3192
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Entry
BSY18_3192 CDS
T04450
Name
(GenBank) DEAD/DEAH box helicase family protein
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
blas
Blastomonas sp. RAC04
Pathway
blas03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
blas00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BSY18_3192
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
blas03019
]
BSY18_3192
Enzymes [BR:
blas01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BSY18_3192
Messenger RNA biogenesis [BR:
blas03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BSY18_3192
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
UTP25
AAA_22
P-loop_SecA
UvrD-helicase
Motif
Other DBs
NCBI-ProteinID:
AOF99426
UniProt:
A0A1B3N250
LinkDB
All DBs
Position
complement(3375865..3377259)
Genome browser
AA seq
464 aa
AA seq
DB search
MSYFHELGLADPILRALDSKGYDTPTPIQKDAIPALLQGRDLLGIAQTGTGKTAAFSLPS
LHHLAKESKGRTHKGVRMLVLSPTRELAAQIAENIREYARFLNLSVNCIFGGVPIFQQKK
KLAPGTDVLVATPGRLLDLIEQRAVTLENVEIFVLDEADQMMDLGFIVPLKRIASMLPKN
RQSLFFSATMPKAIAELGARFLNNPVRVEVAPQATTAERVEQYVTFVSQSEKQALLTLKL
QEIRPERTLVFTRTKHGADKVVRALAGAGIRSAAIHGNKSQGQRTAALKAFKDNEIKVLI
ATDIAARGIDITGVSHVFNYDLPNVAEQYVHRIGRTARNGADGIAIAFVSGDERGLLKDI
ERLTKVKPVPMPLPKGFSEAAAQLPPPVKAPVNSGGGGRGGERGSGDRSGPGGRNYGPKR
DGARRRSGGGGRPGGGGGRSGGGGGGGARVGGVGAHKDSVKRIG
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgtcttatttccatgaacttggccttgccgatccgatcctgcgcgcgctcgattccaag
ggttacgataccccgacgccgatccagaaggacgccattcctgctctgctgcagggccgc
gacctgctcggtatcgcgcagaccggcaccggcaagaccgcagccttctcgctgccctcg
ctgcatcacctcgccaaggaatccaagggccgcacgcacaagggcgtgcgcatgctggtc
ctctcgccgacccgcgaactggccgcgcagatcgccgagaacatccgcgaatatgcgcgc
ttcctgaacctttcggtcaactgcatcttcggcggcgtgccgatcttccagcagaagaag
aagctggctcccggcaccgacgttctcgtcgcaacgccgggccgcctgctcgacctgatc
gagcagcgcgcggtgacgctcgagaatgtcgagatcttcgtgctcgacgaagccgaccag
atgatggacctaggcttcatcgttccgctgaagcgcatcgcatcgatgctgcccaagaac
cgccagagcctgtttttctccgcgaccatgcccaaggcgattgccgagctgggtgcgcgg
ttcctgaacaacccggtccgcgtcgaagtcgccccgcaggcgacgacggccgagcgcgtc
gagcagtatgtcaccttcgtcagccagagcgagaagcaggcgcttctcacgctcaagctg
caggaaatccgccccgaacgcacgctcgtcttcacccgcaccaagcatggcgcggacaag
gtggtgcgcgcgctggcaggagcgggcatccgttccgccgcgatccatggcaacaagagc
cagggccagcggactgcggcattgaaggcgttcaaggacaacgaaatcaaggtcctgatc
gcgaccgatatcgcggcacgcggcatcgacatcaccggtgtcagccatgtgttcaactat
gatctgcccaacgtggccgagcagtacgtccaccgtatcggtcgtaccgcgcgcaacggc
gccgacggcatcgcgattgctttcgtcagcggtgacgagcgcggcctgctcaaggacatc
gaacgcctcaccaaggtgaagccggttccgatgccgctgcccaagggcttcagcgaagcc
gcagcgcagcttccgcctccggtcaaggcgcccgtcaattcgggcggcggcggtcgcggt
ggcgaacgtggcagcggcgatcgctctggccccggtggccgcaactacggccccaagcgt
gacggcgcacgtcgtcgctcgggcggcggtggtcgtcccggtggcggtggtggccgctcg
ggtggcggtggcggcggcggtgcccgcgtcggcggcgtcggcgcgcacaaggacagcgtc
aagcggatcggctga
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