Alkalihalobacillus lehensis: BleG1_3934
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Entry
BleG1_3934 CDS
T03204
Name
(GenBank) ATP-dependent DNA ligase
KO
K01971
bifunctional non-homologous end joining protein LigD [EC:
6.5.1.1
]
Organism
ble
Alkalihalobacillus lehensis
Pathway
ble03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
ble00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
BleG1_3934
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ble03400
]
BleG1_3934
Enzymes [BR:
ble01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
BleG1_3934
DNA repair and recombination proteins [BR:
ble03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
BleG1_3934
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigD_Prim-Pol
DNA_ligase_A_M
RNA_ligase
Motif
Other DBs
NCBI-ProteinID:
AIC96481
UniProt:
A0A060LZ04
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All DBs
Position
3812128..3813933
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AA seq
601 aa
AA seq
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MKPMLATAAATVPKGDQWSYEVKYDGFRCLLHWDKDGPALFSRNEKELSKAFPEIIQACL
QIEEKIKKHLPLIIDAEIVSLANPYQSTFSIVHRRAKLRSNTQITNYSQRLPVSLMAFDL
LMEKGRSLTDLPLKERRRKLNLLENQTPTLAIIQTYKNLKEIETIVKKYNGEGIVAKKNT
STYISKRSSQWVKIKNYRYVHVILTEYDKQNSYFQGAVYQQDTLVPIVQFSHGLHADNRK
ALASLFEKNGERVGQERWTLPPSICVEVGCISFDGDQLREPFFQSFLLEERVEDCTWQNL
LSQLQPLPANVVVTSDDKPIWPAIQYTKMDYLQYLHEVASTMLPFLTNRLLTTIRYPHGA
ESEAFYQKNCPDYAPDFIHTHNRDGINYIVCHSLESLLWLGNQLALEYHLPFQNKDQSCP
SEIVFDLDPPSVEQFSLAVKAALALKEVITSFGLMVYIKTSGNKGLQLYLPLPEETFTYQ
ETRVFCQFISRYVVEQHPEHFTLERLKKNRANRLYVDYLQHDEGKTLIAPYSPRGHSGGL
VATPLYWEEVTNQLSPSLFTLTHVVNRLKLEGDPFRTFRENVQEQGKRFSDVLLHLQSLL
S
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgaagccaatgttagctacagctgcagctactgttccaaaaggagaccaatggtcatat
gaggtaaaatacgatggatttcgctgcttgctccactgggacaaggacggaccagcacta
ttcagtcgaaatgaaaaagaattatcaaaggcatttcctgaaataattcaagcctgccta
cagattgaagagaaaataaaaaagcatctcccacttattattgatgcagagatcgtatca
ttagcgaacccttaccaaagtactttctctattgtgcatcgtcgcgcaaaacttcgcagc
aacacacaaattacgaactactcccaacgcttgcctgtttctcttatggcttttgatcta
ttaatggaaaaaggccgttctctaacagaccttccgttaaaggaacgtagacgaaaattg
aatttacttgaaaatcaaacaccaacgttagccattattcaaacctataaaaaccttaaa
gagatagagaccattgtgaagaaatacaacggagaaggcattgtagcgaaaaaaaataca
agcacctatatttctaaacgatcctcccagtgggttaagataaagaactatcgctatgtt
catgtcattttaaccgagtacgataaacaaaatagttatttccagggcgcggtgtatcaa
caagatacattagttcctattgttcagttttcacatgggttacatgctgacaatcgaaaa
gcattagcctctctttttgagaagaacggggaacgtgtcggtcaagaacgatggacttta
cctccttctatttgcgtggaagttggctgcattagttttgatggcgatcaacttagagag
ccgttttttcaatcgtttttattagaagaaagggtagaggattgcacgtggcaaaacctt
ctttctcagctacagcccttgcctgctaacgtggtagttacaagtgatgataaacctatt
tggccagctatacagtatacgaaaatggattatttgcagtacttacatgaggttgcatca
actatgctcccttttttaacaaatcggctgctaacaaccattcgttatcctcacggtgcc
gaaagcgaagccttttatcaaaaaaattgcccagattatgcacccgattttatccataca
cataaccgtgacggcataaactatattgtttgtcattcacttgaatcgctactgtggtta
gggaatcagctcgcactagagtatcatcttccttttcagaataaagatcaatcatgcccc
tcagaaattgtgttcgacttagatccgcctagtgtggaacaattttctcttgctgtaaaa
gcagctcttgctctaaaggaagtgattacttcctttggcttaatggtttacatcaaaacg
tcgggaaataaaggcttacagctatacctgcctttaccagaagaaacctttacttatcaa
gagacaagggttttctgtcagtttattagtaggtatgtggtagaacagcatccagaacat
tttacacttgaacgattgaagaaaaatcgcgcaaatcgattatacgttgattatttgcag
catgacgagggaaaaactcttattgcgccttattcaccccgtggacatagtggtggtcta
gttgccactcctctttattgggaagaggtgaccaatcaattaagcccctccctttttaca
ctgactcatgttgtaaaccgattaaaactggagggagacccttttcgaacatttcgagaa
aatgtgcaggaacaaggaaagcgattttcagatgttcttttacatttacaatcattactt
tcttaa
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