Bacillus paralicheniformis: BaLi_c29870
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Entry
BaLi_c29870 CDS
T02694
Symbol
recJ
Name
(GenBank) single-strand DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
blh
Bacillus paralicheniformis
Pathway
blh03410
Base excision repair
blh03430
Mismatch repair
blh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
blh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BaLi_c29870 (recJ)
03430 Mismatch repair
BaLi_c29870 (recJ)
03440 Homologous recombination
BaLi_c29870 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
blh03400
]
BaLi_c29870 (recJ)
DNA repair and recombination proteins [BR:
blh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
BaLi_c29870 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
BaLi_c29870 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
BaLi_c29870 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ssDNA-exonuc_C
RecJ_OB
DHH
DHHA1
Toprim
Motif
Other DBs
NCBI-ProteinID:
AGN37333
LinkDB
All DBs
Position
complement(2976250..2978598)
Genome browser
AA seq
782 aa
AA seq
DB search
MLASKMRWDVQTPDKEKVEQLAGRLGITPLAASLLVMRGYDTADKASSFLNGKDAVFHDP
YLLKDMEKAVQRIKQAISDQEKIMIYGDYDADGVTSTTVLLQMLKKCSAQADFYIPDRFK
EGYGPNEAAFRGIKESGYSLIITVDTGIAAVHEAEVAKELGVDLIITDHHEPGPVLPDAY
AIIHPKQPGCGYPFKELAGVGVAFKLAHALNGELPEDLLDLCAIGTIADLVPLHDENRQI
AKRGMEQFRRTKRPGLKALTKIAGAEIHSADEETIGFQIAPRLNAVGRIEQADPAVYLLN
TEDETEAEELAEDINALNKERQKIVNQMTEEAVQMIEEEGLDQPVIVAARPGWNPGVVGI
VASKLVERYYRPAIVLGIDEEKGIAKGSARSIKGFDLFQNLSECRDILPHFGGHPMAAGM
TLNLEDVSALRERINRQAEAVLTEEDFIPVQDVDLCCRLEDITVDSIAEMNMLAPFGTGN
PKPFVLVSDVKIDDSRKIGANKNHLKLVLADGENKLDCIGFYKGAIEDGIVPGAKISIVG
ELSINEWNNRKKPQLMIKDAAVNEWQLFDLRGKRSWEEKILQLDPAKRACICFREETKAK
LAGTGLEEELTVISGPEEAERLDLESRYAVFIDIPPSLDIFDQVIKGKKLERIYLIFYQS
DEHFFSTFPTREYFKWYYAFLLKRGSFDLPKYGGELARHKGWTKDTIDFMTKVFFELGFV
TIENGVLSVVYHAERRDLTDSETYREKQRLIELEQKLIYSSAGELKQWLDKRMAENAVAY
KV
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atgttagcgtcaaaaatgcgttgggacgtgcaaacgcccgacaaagaaaaggtggagcag
ctcgccggaagattaggcattactccccttgccgcctcattgcttgtcatgagaggttac
gatacagccgacaaagcatcttcatttttaaatggcaaggatgctgtttttcacgatcct
tatctgctgaaagatatggaaaaagctgtacagagaatcaaacaggcaatttcagatcaa
gaaaagattatgatttacggcgattatgatgcggacggtgtgacaagcacgactgtcctt
ttgcaaatgttgaaaaaatgttcagcacaagccgatttttatatacctgaccgctttaaa
gaagggtacggcccgaatgaagcggcctttcgcgggatcaaagaatcaggctattcattg
atcatcacagttgacacaggcattgccgccgttcatgaagctgaagtcgctaaagagctt
ggcgtcgatttgatcattacggatcaccatgagccgggccccgttttgccggatgcctat
gcgatcattcatccgaagcagccgggctgcggctatccatttaaagagctagccggcgtc
ggtgtcgcatttaagctagcccacgctttgaacggagagctcccggaagatttgctcgac
ctttgtgcgatcggcacgattgccgaccttgtgccgctccatgatgaaaacaggcagatt
gccaagcgcggcatggaacagttcaggaggacgaagcgccccggattaaaggcgctgacc
aaaattgccggagcggagatacatagtgcggatgaagagaccatcggttttcaaatcgcg
ccccgcttaaacgcggtcggcagaattgaacaggctgacccggccgtctacctcctgaac
acagaagacgaaacagaagcagaagagctggccgaagacatcaacgccttgaacaaggag
cgccaaaaaatcgtcaatcagatgacagaggaagccgttcagatgatcgaggaggaaggc
cttgaccagccggtgatcgtcgcggcgcggccgggctggaatcccggcgtcgtcggaatc
gtggcttcaaagcttgtcgagaggtattacaggccagccatcgttctcggtatcgatgaa
gaaaaaggcattgccaaaggatctgcgcgcagcatcaaaggatttgatttatttcaaaat
ctctcggagtgccgggatattctcccgcacttcggcgggcacccgatggcagccggaatg
acgctcaacctggaagatgtttcggcactaagggagagaatcaaccgtcaggctgaagcg
gttctgaccgaggaagattttattcccgtccaagacgtcgatttgtgctgccggctcgaa
gatatcacggttgacagcattgccgaaatgaacatgctggcgccgttcggcacgggaaat
ccgaagccgttcgttcttgtcagcgacgttaaaattgatgattccaggaaaatcggcgcc
aacaagaatcacttgaagcttgtcctggcagacggcgagaacaagctcgattgcatcgga
ttttataaaggcgccatcgaagacgggatcgttcctggagcaaagatttcgattgtcggg
gaactgtcgattaacgagtggaacaacagaaaaaaaccgcagctgatgatcaaagatgcg
gccgtcaatgaatggcagctgtttgatctgcggggaaaacggtcatgggaagaaaaaata
ttgcagctggaccctgcaaaacgggcgtgcatctgcttccgcgaggaaacaaaagcgaag
cttgcggggacaggccttgaagaagagctgaccgtcatcagcggccctgaagaggcagag
cgtctcgaccttgagagccgctatgcggtatttatagatattccgccgtcgctcgacatc
tttgaccaagtgataaaaggcaaaaaactggagcgcatttatctgattttttatcaatca
gatgaacattttttctcaacatttccaacaagggaatactttaaatggtactatgctttc
ctcctgaaaagaggttcttttgacttgccgaaatacggcggggagcttgccagacataaa
ggctggacaaaagacacaattgatttcatgacaaaggtgttttttgagctcggttttgtt
acaatagagaatggtgttttatctgttgtttatcatgccgaaaggcgcgatctgacagat
tctgaaacctaccgggaaaaacagcgcctgattgaattggagcaaaagctcatttattct
tcggcgggtgagcttaaacagtggctggataagcggatggcggaaaacgccgtcgcttat
aaagtatga
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