Blautia liquoris: INP51_01205
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Entry
INP51_01205 CDS
T07726
Symbol
ligD
Name
(GenBank) DNA ligase D
KO
K01971
bifunctional non-homologous end joining protein LigD [EC:
6.5.1.1
]
Organism
bliq
Blautia liquoris
Pathway
bliq03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
bliq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
INP51_01205 (ligD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bliq03400
]
INP51_01205 (ligD)
Enzymes [BR:
bliq01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
INP51_01205 (ligD)
DNA repair and recombination proteins [BR:
bliq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
INP51_01205 (ligD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigD_Prim-Pol
LigD_N
DNA_ligase_A_M
DNA_ligase_A_C
mRNA_cap_enzyme
DNA_primase_S
Motif
Other DBs
NCBI-ProteinID:
QOV20874
UniProt:
A0A7M2RLL0
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All DBs
Position
250005..252497
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AA seq
830 aa
AA seq
DB search
MMDKISEYRQKRNFDRSYEPESANYPMRNEHSGGFRFVVQHHMASHDHYDFRLEWDGVLL
SWAVPKGPSYDTRDKRLAVHVEDHPLEYRNFEGTIPKGEYGGGTVMLWDEGFWEPREDMK
QGLFKGQVKMNLSGTRLRGKWALIRLKGKKEQKSRDKQTDNWLLLKERDEYAGMDFRLEN
FTTSVRTGRTMAEIEEGTEEKIVRNPFRQTKVQLAKLVHQVPKEKGWLYEMKYDGYRIVA
FAEGNQVRLMTRNGVDVTEKFSDIAHSIVSFAKGRALVLDGEMTVTDSNGRTDFQALQDY
LREKKQKDLTYIIFDLLALDGTDIRDLPLAKRKEKLERLLEDAPENLYYSRHVRDMGNES
FAAAEKMGMEGIIGKREDCVYSGTRNGDWIKLKCVKRQEFVIGGYAVRDDSTRQISSLLL
GAYQDNCFLYVGRVGTGFKEDEIQELLQQFSMIKRIDSPFLTIPKPRSGERVTWVKPKLL
AEVKFAQWTKDHILRHASFLGLRTDKDPLSVRMEIQDGPDTFREAKASEKTMLHRKPDPS
GSSESRKIGGVIITHPDKLMFEEDGITKGEMAEYYAKVSKRMLPYVSKRLLSLVCCPKGI
AQTSFFKKHPASADKKAPVLTITENDGEESDYLYIDDLHDLLLQVQNNAVEFHTWGSRTE
DLEKPDMMVFDLDPDEGMDLARVRQGVLDIRNILTDLSLTSYLKTSGGKGYHIVVPFQPG
AGWESFSGFARKTAEVLEQQWPDRYTSNIRKAKRKGRIFIDWIRNGRGATSVAPYSIRAR
KGARVSMPITWDELKDVDPDGITMEEALKRLQFPDPWAGFYESSQRLNRN
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
attatggacaaaatcagtgaatatcggcagaaaagaaattttgaccgctcctatgagccc
gaaagtgcaaattaccccatgagaaatgaacactcaggcgggtttcgatttgttgttcag
caccatatggcaagtcatgaccactatgactttcgcctggaatgggatggtgttctgctc
tcctgggcggtgcccaaagggccctcctatgatacacgtgacaagcgattggccgttcat
gtggaggatcatcctttggagtatcgcaactttgagggcacgattccaaaaggtgagtac
ggcggcggaacggtcatgctctgggatgagggtttctgggaaccgagggaagatatgaaa
caggggcttttcaaaggtcaggtgaagatgaatctgagcgggacacgtctgaggggaaag
tgggctttgattcgcctaaaaggaaagaaagaacagaagtctagggataaacaaacagat
aactggctcttattgaaggaaagagatgagtatgccggtatggattttcgcttggagaac
ttcactacaagcgtgagaacgggcaggacgatggcagagattgaagaggggacagaggaa
aagatagtcaggaacccctttcgacagaccaaagttcaactggcaaaactcgtacatcag
gtccccaaagaaaaaggatggctgtatgagatgaagtatgacggctacagaatcgtagcg
tttgccgagggaaaccaagttcgcctgatgacgagaaacggtgtggacgttacggagaaa
ttttccgatattgcccattccattgtaagttttgcaaaaggaagagctctggttctggac
ggtgagatgacagtgacagattcgaatggcaggacagatttccaggcactgcaggattat
ctgcgagagaagaaacaaaaggatctgacttatataatattcgaccttcttgccttagat
ggcacagatataagagatctgccgctcgccaaaagaaaagagaaacttgaaaggttgctg
gaagatgcgccggaaaatctatattatagccgtcatgtcagagatatgggaaatgagagc
tttgccgccgccgagaagatgggaatggagggaatcatcggaaaaagagaggattgcgtc
tacagcggaacaagaaatggtgattggattaaattgaagtgcgtgaagagacaggagttt
gtgatcggaggatatgctgttcgcgatgacagtacaagacagatcagttcactgttattg
ggagcttatcaggataactgcttcctatatgtaggccgggtggggactggatttaaagaa
gatgagatacaggagcttctacaacagttttcaatgataaaaagaattgattcgcctttt
ttaactataccaaaacccagatcaggcgagcgtgtaacctgggtaaagccaaaactgctc
gcagaggtgaaatttgcgcagtggacgaaagatcatattttgcgccatgcgagttttctc
gggctgcggacggataaggacccgctttctgtccggatggaaatacaagatggccctgat
acgtttagagaagcaaaagcatcagaaaaaaccatgcttcacagaaagcctgacccttcc
ggcagcagtgaatcacgaaagattgggggagtaatcattacccatccggataagttgatg
tttgaggaagatggcatcacaaaaggagagatggccgagtactatgccaaagtatccaaa
cggatgctgccatatgtaagcaaaagacttttgagcctcgtatgttgtccaaaaggaatc
gcacagacaagcttttttaagaaacatccggcatcggccgataaaaaggctccggtgctt
acgatcactgaaaatgacggcgaagagtcggattatctctatatagatgacttacacgat
ctcttacttcaggttcagaacaacgcagtagaatttcatacctgggggagcaggacagag
gacctcgaaaaacctgacatgatggtgtttgatctggatccggacgaggggatggacctt
gcgcgtgtgcgtcagggtgtattggatatccgaaatattttaacagatctctcgcttacc
tcttacttgaagaccagtggtgggaaaggttatcatatcgttgtcccgtttcagcccggt
gccggctgggagtcgttttctggttttgcgcgaaagacagctgaggttttggagcagcag
tggccggatcggtatacaagcaatatcagaaaagcgaaacgaaaaggcagaatctttatc
gattggatacgaaacggacgaggagccacaagtgttgctccctattcgattcgtgcccgc
aaaggtgccagagtatcgatgccgattacgtgggatgagttaaaggatgtggatcctgat
gggattacgatggaagaggcactcaagagactacagtttccggatccttgggcagggttc
tatgaaagcagccagagactgaataggaactga
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