Bifidobacterium longum DJO10A: BLD_0603
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Entry
BLD_0603 CDS
T00707
Symbol
csdB
Name
(GenBank) Selenocysteine lyase
KO
K11717
cysteine desulfurase / selenocysteine lyase [EC:
2.8.1.7
4.4.1.16
]
Organism
blj
Bifidobacterium longum DJO10A
Pathway
blj00450
Selenocompound metabolism
blj01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
blj00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
BLD_0603 (csdB)
Enzymes [BR:
blj01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.7 cysteine desulfurase
BLD_0603 (csdB)
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.16 selenocysteine lyase
BLD_0603 (csdB)
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Gene cluster
GFIT
Motif
Pfam:
Aminotran_5
Cys_Met_Meta_PP
Aminotran_1_2
DegT_DnrJ_EryC1
Met_gamma_lyase
Motif
Other DBs
NCBI-ProteinID:
ACD98049
UniProt:
B3DSD0
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All DBs
Position
complement(688459..689733)
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AA seq
424 aa
AA seq
DB search
MVDFKAIRAQFPILDQEIHGHPLVYLDSAATSQKPNAVIDAEANFYRTINAGVHRGAHEL
AARSTMAFEEARAKVAKLVGANAAEGEEEVVVTGGATAGLNLLATAFGNASLGRGGEAAK
RFALKPGDEIVVSRAEHHSVLLPFQELSYRTGATFKWIDLTEDGRVRTDNLDEVITERTK
VVAVTHVGNATGAITNIAPIIKRAHEVGSIFILDACQSVPHLKVDFHALDVDFAAWSAHK
MYGPTGVGFLYGKRDLLEALPPANFGGSMVELAYMDHEAQYMAPPARFEAGTQPVAQVVA
AGVAAEWMMNIGLENIEAHEKTIAAELLKLGDVDGIRILGPRENVDRIGTVAFDVAGVHP
HDVGQFIDAQGIAIRVGHHCAQPVHRHFGLYASNRASSGVYNSVEDAQALVEAAKGIRKF
FGVE
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atggttgattttaaggcgattcgggcgcagttcccgattctggatcaggagattcacggg
cacccgctcgtgtacctggattctgcggccacctcgcagaagccgaatgcggtgatcgac
gccgaggcgaacttctaccgtacaattaacgccggcgtgcaccgtggtgcgcacgagctg
gccgcccgtagcaccatggcctttgaggaggcccgagccaaggtggccaagctggtcggc
gcgaatgcggccgaaggtgaagaggaggtcgtcgtcaccggtggtgccacggccggactg
aacctgctcgccaccgcattcggcaatgcatcgctggggcgtgggggagaagccgccaag
cgttttgccctgaagccgggcgatgagatcgtcgtctcgcgtgcggaacatcattcggtg
ctgctgccgttccaggagctgtcctaccgtaccggcgccaccttcaagtggatcgacctg
accgaggacggccgtgtgcgtacggacaacctcgacgaagtcatcaccgagcgtaccaag
gtcgtggccgtcacccacgtgggcaacgccacgggtgccatcaccaacatcgccccgatc
atcaagcgtgcgcatgaagtaggttcgatcttcatcttggacgcttgccagtccgtaccg
cacctcaaggtcgatttccacgcgcttgatgtggacttcgccgcctggagcgcgcacaag
atgtacggtcctaccggcgtcggtttcctgtacggtaagcgcgacctgctcgaagccctg
ccgccggccaacttcggcggctccatggtcgagctcgcctacatggaccacgaggcccaa
tacatggcccctccggcccgcttcgaggccggcacccagccggtcgcccaagtggtggcc
gcaggcgtcgccgccgaatggatgatgaacatcgggctcgagaacatcgaagcccatgag
aagaccatcgccgccgaactgctcaagctcggcgacgtcgatggcattcgcatcctcggg
ccgcgcgaaaacgtggaccgcatcggcaccgtggcgttcgacgtggccggcgtgcatccg
cacgatgtgggccagttcatcgacgcccagggcatcgcgattcgcgtgggacaccactgt
gcccagccggtacaccgccacttcggcctatacgcatccaaccgtgcctcctccggtgtc
tacaattcggtcgaagatgcccaagcgttggtcgaagcggccaagggcatccgtaagttc
tttggagtggagtaa
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