Bifidobacterium longum subsp. longum KACC 91563: BLNIAS_00854
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Entry
BLNIAS_00854 CDS
T01845
Name
(GenBank) DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
blk
Bifidobacterium longum subsp. longum KACC 91563
Pathway
blk03420
Nucleotide excision repair
blk03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
blk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BLNIAS_00854
03430 Mismatch repair
BLNIAS_00854
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
blk03400
]
BLNIAS_00854
Enzymes [BR:
blk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BLNIAS_00854
DNA repair and recombination proteins [BR:
blk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BLNIAS_00854
MMR (mismatch excision repair)
Other MMR factors
BLNIAS_00854
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_12
Viral_helicase1
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AEI97143
LinkDB
All DBs
Position
699975..701549
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AA seq
524 aa
AA seq
DB search
MEQAQGILEGLDERQRTAATTLQGPVRIIAGAGAGKTRTVTRRIAYACATGAWKPERVLA
VTFSVKAAAEMRARLGQLGVGGGTGRSGSGAGTAGVTAATFHSAALHQLNSVWADICEAP
FPHVIEDQRDVVSRAIIRATARTDADPLTVRDVLAEINWAKISLVAVEDYARACAIAHRQ
PPAGLDTARFADVYSAYEQEKTSRGEIDFDDILLLVCHIMDGFPEAAAQIRSTIGWLTVD
EYQDVSPLQHRLLTLWLGGGGPDGKSAMNRNVCVVGDPAQTIYSFAGASSWDLLRFADEF
GPLAADVNLNTDYRSTPEVVNLANRVLAAAPNREDYLKLVSARESGPRVTRTAYESDMEE
AQGVAARIARLVANGAKPSDCAILTRINAQQPVFGAALRAARLKYRVRKDSGWQSSALAD
DAASKRALLEAMGLDATGLAANDDPGVTISTIHASKGLEFKHVFLIGCSEGLLPYGSPET
GDALEEERRLMYVGITRAEDSLHLSYARTKDGYGVQRRRPSRFL
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atggaacaggcgcaggggattcttgaggggctcgatgagcggcagcgtaccgccgcgact
acgttgcaagggccggtgcgcattatcgccggcgcaggtgccggtaaaacacgcacggtc
acgcggcgaatcgcctatgcctgcgccaccggggcatggaagccggagcgggtgcttgcc
gtcaccttttcggtaaaagcggcggcggaaatgcgcgcacgattgggccagctcggcgta
gggggaggtactggacgttccggttcgggtgcgggaactgccggagtcacggccgcgacc
ttccactcagcggcattgcatcagctcaacagcgtctgggcagacatatgcgaggctcca
tttccgcatgtgatcgaagatcagcgtgacgtcgtctcccgcgcgatcatccgcgccacc
gcacgtaccgatgccgatccgctgaccgttcgcgatgtgctcgccgaaatcaattgggcc
aaaatctcgttggtggcggtggaagattatgcccgggcatgtgccatcgcccataggcag
ccgcccgccggactcgacaccgctcggttcgccgacgtctacagcgcctacgagcaggaa
aagacctcgcgtggcgaaatcgattttgacgatattctgctgctcgtatgccatatcatg
gatggttttcccgaagccgccgcccaaattcgttccaccatcggctggctcaccgtcgac
gagtatcaggacgtctcgcccctgcaacacaggctgctgaccctgtggctgggcggggga
ggacctgacggcaagagcgcaatgaaccgcaacgtatgcgtcgtgggcgatccggcccag
accatctactcgtttgccggtgcctccagctgggatctgctgcgtttcgccgatgaattc
gggccgctcgccgccgatgtcaatctcaacaccgactatcgttcgacgccggaagtcgtg
aacctcgccaaccgggtgcttgcggccgcgccgaaccgtgaggattacctgaaactggtt
tccgcccgtgaatccggcccgcgcgttacccgaaccgcttatgagagcgatatggaagag
gcacagggcgtggcggcacgcatagcccggttggttgccaacggggccaagccgtccgat
tgcgcgatcctcacccgcatcaacgcccaacagccggtattcggtgccgccttgcgcgct
gcgagactgaaatatcgcgtccgcaaggattcgggatggcaatcatccgcgctcgccgac
gatgccgcgtccaaacgcgcactattggaggcgatgggtttggacgccaccggacttgcc
gcaaacgacgatcccggggttacgatttccacgattcacgcatccaagggtctggaattc
aagcacgtgtttctgatcggctgttcggaagggctcttgccgtatggttcgccggaaacg
ggggatgcgctggaagaggaacgccggcttatgtatgtgggcatcacccgagctgaggat
tcgctgcatttgtcgtatgcacggaccaaggatggttatggagtgcagcgcagacgccca
tcacgatttttgtga
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