Bifidobacterium longum subsp. longum JCM 1217: BLLJ_0558
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Entry
BLLJ_0558 CDS
T01419
Name
(GenBank) phenylalanyl-tRNA synthase beta subunit
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
blm
Bifidobacterium longum subsp. longum JCM 1217
Pathway
blm00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
blm00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
BLLJ_0558
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
blm01007
]
BLLJ_0558
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
blm03016
]
BLLJ_0558
Enzymes [BR:
blm01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
BLLJ_0558
Amino acid related enzymes [BR:
blm01007
]
Aminoacyl-tRNA synthetase
Class II (U)
BLLJ_0558
Transfer RNA biogenesis [BR:
blm03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
BLLJ_0558
Prokaryotic type
BLLJ_0558
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B3_4
tRNA_synthFbeta
FDX-ACB
B5
tRNA_bind
DUF2786
Motif
Other DBs
NCBI-ProteinID:
BAJ66226
LinkDB
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Position
706494..709103
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AA seq
869 aa
AA seq
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MPMIDIDWLKDHVEVPEGLTYEQLAKDLVKVGLEEEEIHSSQVTGPIVVGYVVDATPEPQ
KNGKTINWCHVDCGDEWNETDEDGNKVPRGIICGAPNMKAGEKVVVTLPGAVLPGDFKIE
PRKTYGHISNGMCASERELGLGDNHNGIILLRQYGFSEAEYEALKPGQDAMHLLHLDQPL
LEINITPDRGYTLSYRGVAREYHHSTGAAYTDPAVALNEKAPEPADYQPGTPVDIDVEID
DNNPIHGVPGCDRYYARIVKDFNPNAHTPNWMRRRLIRAGMRSISLAVDVTNYVMLDLGQ
PMHAYDLDKLEGPIVVRRANEGEKLTTLDGKEHDLSVEDLLITDSPNGERGSRILGLAGV
MGGLYGEVTADTKNILLEAAHFDQVTIARSARRHKIPSEASRRFERGVDTALQPAATQMA
AELMAKYGNGEPSEHPNDVNNTPRAKAIHFKASEVARVAGLDVDINRISDILTDIGCTVA
GGGNGEFAVTAPSWRPDLNEPCDLVEEVARLVGYDQIPITVPPAPVEGLVGLTPDQQRRR
RVADELAEFGMVESLSYPFVGDDDYKAFGFDPEATKKVSVEIANPLYGDRPYLRREILPT
LATTVQRNIRRGIENVSLYELGHVYLWDPNAPAIPALPGGVRPTDEQLAALDAGLPEQPD
HVAGILTGLAEDDGWMGGKRPVDWSDAVEAVRRIAGRIGAAIELDQPAADDVPVQWHPGR
AARVMVGDVFTGWVGELHPRVNEALGFPAHSAAFELNLTALFATLTGKPVQAKPISTFPP
VKQDLAFTVDETVTAGQLENVIRKAAGANLESIELFDVFTGEQVGEGKKSLAYAVVFRSP
SKTLSAEDSDAIRKAIVAEAAEIGAQLRA
NT seq
2610 nt
NT seq
+upstream
nt +downstream
nt
atgcctatgatcgatatcgattggctcaaggaccatgtcgaggttcccgaaggcctgacc
tacgaacagctcgccaaggaccttgtcaaggtgggtcttgaggaagaggagattcactcc
tctcaggtgaccggcccgattgtggtcggctacgtggtcgacgccacccccgaaccgcag
aagaacggcaagaccatcaactggtgccacgtggactgcggcgacgaatggaacgagacc
gacgaagacggcaacaaggtgccgcgcggcatcatctgcggcgcgcccaacatgaaggcc
ggcgaaaaggtcgtcgtcaccctgcccggtgccgtgctgcccggcgacttcaagatcgaa
ccgcgcaagacctacggccacatctccaacggcatgtgtgcctccgaacgtgagctgggt
ctgggcgacaaccacaacggcatcatcctgctgcgtcagtacggcttctccgaggctgaa
tacgaggctctgaagcctggtcaggatgccatgcacctgctgcacctcgaccagcctctg
cttgagatcaacatcaccccggaccgtggctacacgctgtcctaccgtggcgtggcccgc
gagtaccaccactccaccggtgccgcctacaccgatccggccgtggcactcaacgagaag
gccccggaacctgctgactaccagcccggcaccccggtggacatcgatgttgaaatcgac
gataacaatccgattcacggcgtgcccggttgcgaccgctactacgcgcgtatcgtcaag
gacttcaatcccaacgcccacacgcccaactggatgcgccgccgcctgattcgcgccggc
atgcgctccatctccttggccgtggacgtgaccaactacgtgatgcttgacctcggccag
ccgatgcacgcctacgacctcgacaagctcgaaggcccgattgtcgtgcgccgcgccaac
gagggtgagaaactcaccaccctggacggcaaggaacatgacctgagcgtcgaagatctg
cttatcaccgattcgccgaacggcgaacgcggctcgcgcatcctcggccttgccggtgtg
atgggcggtctgtatggcgaagtgaccgccgacaccaagaacattcttctggaggccgcg
cacttcgatcaggtgaccattgcccgttcggcccgtcgccacaagattccatccgaggcc
tcccgtcgcttcgaacgtggcgtcgacaccgcgctgcagcctgccgccacccagatggcc
gccgagctcatggccaagtacggcaacggcgagcccagcgaacacccgaacgacgtgaac
aacacgccgcgcgccaaggccatccacttcaaggcctccgaagtggcccgcgtagccggc
ctcgacgtggacatcaaccgcatctccgacatcctgaccgacattggctgcacggtggcc
ggtggcggcaacggtgagttcgccgtaaccgcgccgagctggcgtccggacttgaacgag
ccgtgcgacctggtcgaggaggtcgcccgactggtcggctacgaccagattccgatcacc
gtgccgccggcaccggtcgagggtctggtgggcctgaccccggaccagcagcgtcgccgt
cgcgtggcggacgagctcgccgagttcggcatggtcgaatcgctgagctacccgttcgtg
ggtgacgacgattacaaggccttcggcttcgacccggaagccaccaagaaggtcagcgtc
gagatcgccaacccgctctacggcgaccgtccgtacttgcgtcgcgagattctgccgacc
ctggccaccaccgtgcagcgcaacatccgccgcggcatcgaaaacgtgtccctgtacgag
ctcggccacgtctacctgtgggatccgaacgcgcccgccatcccggcactgcccggcggc
gtgcgccccaccgacgaacagctcgccgcgcttgacgccggtctgcccgaacagcccgac
catgtggccggcatcctgaccggtctggccgaggacgacggctggatgggcggcaagcgc
ccggtcgactggtccgacgccgtcgaggccgtgcgccgcatcgccggccgtatcggtgcc
gcaatcgaactcgaccagcccgccgctgacgatgtgcccgtccaatggcaccccggccgc
gccgcccgcgtcatggtgggcgacgtcttcaccggctgggttggtgaactgcatccgcgc
gtcaacgaggcgctcggcttcccggcccattccgcggccttcgagctgaacctcaccgcg
ctgttcgccacgctgaccggcaagcccgtccaggccaagccgatctccacgttcccgccg
gtcaagcaggatttggccttcaccgtggacgagaccgtgaccgcaggccagcttgagaac
gtgattcgcaaggccgccggcgcgaacctcgaatccatcgaactgttcgacgtgttcacc
ggcgaacaggtgggcgagggcaagaagtccctggcctatgcggtggtgttccgttcgccg
agcaagacgctgtccgccgaagacagcgacgccatccgcaaggccatcgtggctgaggcc
gccgaaatcggcgcccagctgcgcgcctga
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