Salinivirga cyanobacteriivorans: L21SP5_02991
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Entry
L21SP5_02991 CDS
T04172
Symbol
cnrH
Name
(GenBank) RNA polymerase sigma factor CnrH
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
blq
Salinivirga cyanobacteriivorans
Pathway
blq02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
blq00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
L21SP5_02991 (cnrH)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
blq03021
]
L21SP5_02991 (cnrH)
Transcription machinery [BR:
blq03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
L21SP5_02991 (cnrH)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_ECF
Sigma70_r4
GerE
Laminin_B
HTH_23
Motif
Other DBs
NCBI-ProteinID:
ALO16611
UniProt:
A0A0S2I2F5
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Position
complement(3609532..3610071)
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AA seq
179 aa
AA seq
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MEKSDKHIIKQIRKGDKTAFEHLFKTHYNELCNFANSFVKDPDEAEEIVQDVFYKLWQKR
KQLIIQKNLRGYLFKTIRNKCTAYGRHLKIKQQYEQDPNTSHTPESPLELLEATQMENLF
NQTLMQLPERCRKIFNLSREQGLKYREIAIELSISIKTVEADMGSTLKALREALKTAQK
NT seq
540 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagtctgacaagcacataataaaacaaataagaaaaggagataaaacagcgttt
gaacacctgtttaaaacccattataacgagctctgcaactttgcaaatagctttgtaaaa
gatccggatgaagcagaggagattgtgcaggacgttttttacaaattgtggcaaaaaaga
aagcagttaatcattcaaaaaaacctcaggggatatctattcaaaaccattcgcaacaag
tgtacagcttatggcaggcatcttaaaattaaacagcagtacgagcaagatccaaacaca
agccatacgccggaaagcccgcttgagttactggaagccacacaaatggagaacctattt
aaccaaaccctgatgcaactgcccgagcggtgtcgtaagatttttaatctgagccgggaa
cagggcctaaaatacagagaaattgccattgaattatccatatcaatcaaaaccgttgaa
gcagatatgggtagtaccctaaaagccctaagagaagcactcaaaacagcacaaaaatga
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