Brevibacterium luteolum: EW640_05470
Help
Entry
EW640_05470 CDS
T06487
Name
(GenBank) ATP-dependent DNA ligase
KO
K01971
bifunctional non-homologous end joining protein LigD [EC:
6.5.1.1
]
Organism
blut
Brevibacterium luteolum
Pathway
blut03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
blut00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
EW640_05470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
blut03400
]
EW640_05470
Enzymes [BR:
blut01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
EW640_05470
DNA repair and recombination proteins [BR:
blut03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
EW640_05470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigD_Prim-Pol
LigD_N
DNA_ligase_A_M
DNA_ligase_A_C
RNA_ligase
mRNA_cap_enzyme
DNA_primase_S
Motif
Other DBs
NCBI-ProteinID:
QIN28788
UniProt:
A0A6G8KVI0
LinkDB
All DBs
Position
complement(1197573..1200002)
Genome browser
AA seq
809 aa
AA seq
DB search
MASARKKFQVGDRTLTVSNLDKVLYPETGTTKADVIRYYLTVADVLIPQVSGRPVTRKRW
VDGVGTAAEVGDAFFRKDLEDSAPDWIPTGTIKHKSGTNTYPVAEEPAVLAWFGQVAALE
LHTPQWRFGRNGQPRNPDRLVLDLDPGPGTDLTDCATVAAWCREILEDMGMPTYPVTSGS
KGIHLYAALDGRHNAEQISDVAHELARALEADHPDEVVSTMKKTDRTGRVFLDWSQNSAS
KTTVSPYSLRGRLRPTVAAPRTWDELADPDLAQLEFEDVIARVEEGLDPIADLGADRLET
YRSMRDAAKTSEPVPAHRPADTSKVEAPSFVIQEHHASSLHWDFRLEHSGVLVSWAVPKG
VPLKHNVNRLAVQTEDHPLEYGSFEGTIAKGEYGAGEVTIWDAGTYEREKWRDDKEIIAV
LHGREDGGLKGIPRRFALIRTKGMNGKNTWLLQLMKDQPGDGNGPAPEAGERGEKAAPSA
GGQDSGDVPALSDIPAPMLARAGSEADIRLGKGAGETWVAEMKWDGYRMLAGVGTGGVVL
ASRNGKDMSAQFPQAGELTELLEGTGILDGELVALDGDGRPDFSLLQAMLSGEDDVPDDA
ELRYMVFDILAHNGRSLTRETYRERRKILAEVLDEGEYVTVPPAHEGSLEAAIRASRSLG
LEGVVAKRADSVYLTGQRGSAWIKLKTQLHQEVVVIGARDGKGARSGGIGSLLVAVPDGD
GELRYAGRVGTGFTDRQLAEIEAKLRKRERKTPPVDDVPTEDQADAWWVRPTLVAEATLA
GRTRQGRVRQAAWRGWRDDKDPDEVRWEV
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcagctcgcaagaagttccaggtcggagaccgcacgctgaccgtctccaatctc
gacaaggtcctctacccggagaccggcaccacgaaggccgacgtcatccgctactacctc
accgtcgctgacgtcctcatcccgcaggtcagcggccggcccgtcacccgcaaacgctgg
gtcgacggggtcggcaccgccgccgaggtgggggacgccttcttccgcaaagacctggag
gactcggccccggactggatccccaccggcacgatcaagcacaagagcggcaccaacacc
tatccggtggccgaggaaccggccgtacttgcgtggttcggccaagtcgcagccctcgaa
ctgcacaccccacagtggcgcttcggccgcaacggccagccgcgcaaccccgaccgcctc
gtcctcgacctcgaccccggcccgggaaccgacctcaccgactgcgccaccgtcgccgcc
tggtgccgggagatcctcgaggacatgggcatgccgacctacccggtgacctccggatcg
aagggcatccacctctacgccgctcttgacggtcggcacaacgccgagcagatctccgac
gtcgcccacgaactcgcccgcgcactcgaagccgaccaccccgatgaggtcgtctcgacg
atgaagaagaccgaccgcaccggcagggtcttcctcgactggagtcagaacagcgcctcg
aagaccaccgtgagcccctactcgctgcgcggtcgtctgcgccccaccgtcgccgccccg
cgcacttgggatgaactggccgacccggaccttgcgcagctggagttcgaggacgtcatc
gcacgcgtcgaggagggtctggacccaattgcggacctcggtgctgaccggttggagacc
taccggtcgatgcgcgacgccgccaagaccagcgaaccggttccggcacacaggccagcc
gacacctcgaaagtggaggccccgagcttcgtcatccaggagcaccacgccagcagcctg
cactgggacttccggctggagcactccggagtgctcgtcagctgggcggtgcccaagggc
gtgccgctgaagcacaacgtcaaccggctggccgtccagaccgaggaccacccgctcgaa
tacggcagcttcgagggcacgatcgccaagggcgagtacggcgccggagaggtcaccatc
tgggatgccggcacgtatgagcgcgagaagtggcgtgatgacaaggagatcatcgccgtc
ctccacggccgcgaggacggcgggctcaaaggcatcccacgccggttcgcactcatccgc
acgaagggaatgaacgggaagaacacgtggctgctgcagctgatgaaggaccagcccggc
gacgggaacggtcccgcgcccgaggcgggggagcgcggcgagaaggcggctccttctgca
ggtggccaggactccggcgacgttcctgcgctcagcgacatccccgccccgatgctcgcc
cgcgcgggctcggaggccgacatccgcctcgggaagggtgctggcgagacgtgggtcgcg
gagatgaaatgggacggttaccggatgctcgcaggcgtcggcaccgggggagtggtgctc
gccagccgcaacggcaaggacatgagcgcgcagttcccgcaggctggcgagctcactgag
ttgctagagggcaccgggatcctcgacggggagctcgtagcgctcgacggggacgggagg
ccggacttcagtctgctgcaggcgatgctcagcggcgaggacgacgtgcccgatgacgct
gagctgcgctatatggtcttcgacatcctcgcccacaacggccgctcgctcacccgcgaa
acctatcgagagcgccggaagatcctcgccgaggtgcttgatgaaggcgagtacgtcacc
gtgccgccggcgcacgaggggtcgctggaggcggcgatcagggccagccggtcgctcggg
ctcgaaggggtcgtcgccaagcgcgccgattcggtctacctgaccggccagcgcggctcg
gcgtggatcaagctcaaaacgcagctgcaccaggaggtcgtcgtcatcggtgcccgggat
gggaagggcgcccggtctggtgggatcggttcgctgcttgtcgccgtgcctgatggtgac
ggcgagctgcgctacgccggccgggtcggaacaggattcaccgaccggcagctggctgag
atcgaggcgaagctgcggaaacgtgagcgcaagaccccgccggtcgacgatgtgccgacc
gaagaccaggctgatgcatggtgggtgagaccgacgctcgtcgccgaggcgacgcttgcc
gggcggacacggcagggccgggtccggcaggccgcctggcgcggttggcgcgatgacaag
gatcctgatgaggtgcggtgggaggtgtga
DBGET
integrated database retrieval system