Brevibacterium luteolum: EW640_06285
Help
Entry
EW640_06285 CDS
T06487
Symbol
mfd
Name
(GenBank) transcription-repair coupling factor
KO
K03723
transcription-repair coupling factor (superfamily II helicase) [EC:
5.6.2.4
]
Organism
blut
Brevibacterium luteolum
Pathway
blut03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
blut00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
EW640_06285 (mfd)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
blut03400
]
EW640_06285 (mfd)
Enzymes [BR:
blut01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EW640_06285 (mfd)
DNA repair and recombination proteins [BR:
blut03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
TRCF (transcription-repair coupling factor)
EW640_06285 (mfd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
UvrB_inter
TRCF
CarD_TRCF_RID
Helicase_C
ResIII
UB2H
AAA_22
RecG_dom3_C
MFD_D3
Motif
Other DBs
NCBI-ProteinID:
QIN28931
UniProt:
A0A6G8KWD5
LinkDB
All DBs
Position
complement(1382643..1386299)
Genome browser
AA seq
1218 aa
AA seq
DB search
MPSRLGRVSVTGISRLLQTNSAYSAALAALADTSTAGGSISAITGLWPSVMADAAQSGPI
LAVTATGREADHLERALADYLPESSVAVFPSWETLPHEKLSPRSDTVGRRLSVLRRLSHP
GDEPLNVVIAPIRALLQPIVTGLGELTPVQLKVGDEVELADLAEQLSDLAYSRVDMVSRR
GEYAVRGGILDIFPPTDDQALRIEFFGDEVDEIRPFSVADQRSLPTVDDAVYTLWAPPCR
EVLLTASVRERARDLIGTLPQAGEMLAKIADGIAVEGMESLAPVLAEGMEAFVDTLPEGT
RILVTAPEKVAARAEDLVATTEEFLAAAWTSAAAGGETPIDLSPASFRTLEETQEAAAAR
SLPWWEIGGFARDAELSEATGETVLELPGRQPRGYAGDVEAILTDVRALVHDSWDVCVLT
EGRGPGERMVEVFSDADVPARFVDDLTEPTTSGAVTVTTAADFGGFVIGEMTLAVLTEAD
VLGRAAATSTRDMRRLPARRRRHQVDPLDLKPGDYVVHEQHGVGRFVEMVARTMGRGEQA
HTREYLVIEYAPSKRGQPGDRLYVPSDSLDQVTRYVGGESPSVNKMGGSDWAKTKSKARK
AVKEIARELIHLYSARRASSGHAFGPDTPWQRELEDAFHYMETPDQLTTIDEVKADMEKP
IPMDRLICGDVGYGKTEVAVRAAFKAIQDGKQVAVLVPTTLLVQQHFDTFSERYSGFPVT
VGKLSRFQSPADSEKTKQDLKAGSLDLVIGTHRLLSGEVQFKNLGLVIIDEEQRFGVEHK
ETLKALRTNVDVLAMSATPIPRTLEMAVTGIREMSTLATPPEDRHPVLTYVGRYEDRQVT
AAIRRELLREGQVFFIHNRTQDIEKTAAHLAELVPEARIAVAHGKMSEQRLEQVIVDFWE
KRYDVLVCTTIVETGIDISNANTLIVDRADRMGLSQLHQLRGRVGRSRERAYAYFLYPAD
MTLTETAHDRLQTVAAHTELGAGMQVAMKDLEIRGAGNLLGGQQSGHIEGVGFDLYVRLV
GEAVANFRGEGEEEVAEMRIELPIDAHLPTDYVEHERLRLEAYRKLAAATDDAEIREVLA
ELTDRYGPYPEAVEVLAEIARLRIRARASGVQEILSVGNTIRFAPVELADSQIVRLKRLY
PKSLIKPALRAIQVPKPQSGVGFDKKDLVDRELIDWVHQFLDAILPAPEAEAGSADETGS
ADKAESGEKAGAKAESNA
NT seq
3657 nt
NT seq
+upstream
nt +downstream
nt
atgccgagtagacttggtcgcgtgtctgtgaccggaatctcccgcctgctgcaaaccaac
tccgcctacagtgctgccctggcagcgctcgctgacacctcgacggcaggcgggtcgatc
agcgcgatcaccggactatggccctccgtcatggccgatgccgcccagtccgggccgatc
ctcgcggtcaccgccaccggccgggaggccgaccacctcgaacgcgcactggccgactac
ctgccggaaagctcggttgccgtgttccccagctgggagaccctcccgcacgagaagctc
tccccgcgctcagacaccgtcggacggcgcctgtccgtcctgcgccgcctcagccacccc
ggcgatgagccgctgaatgtcgtcatcgccccgatccgggcactgctgcagccgatcgtc
accgggctcggcgagctgacccccgtccagctgaaagtcggtgacgaggtcgagctcgcc
gatctggccgaacagctctccgacctggcctactcccgcgtcgacatggtctcccgccgc
ggtgagtacgcggtgcgcggcggcatcctcgacatcttcccgccgacagacgaccaggcg
ctgcgcatcgagttcttcggcgacgaagtcgatgagatccgcccgttctccgtggccgac
cagcgctccctgcccaccgtcgacgacgccgtctacacgctctgggcgccaccgtgccgc
gaagtgctgctcaccgcctccgtccgcgaacgggcccgcgacctcatcggaacgctgccg
caggccggagagatgctggccaagatcgccgacggcatcgccgtcgaaggcatggagtcc
ttagccccggtgctcgccgagggcatggaggccttcgtcgacaccctgccggaaggcacc
cggatcctcgtgaccgccccggagaaggtcgccgcccgtgccgaggatctcgtcgccacg
accgaagagttcctcgccgccgcctggacctcagccgccgctggtggagagacgccgatc
gacctgtcaccggccagcttccgcaccctggaggagacccaggaagccgccgctgcccgc
agcctgccgtggtgggagatcggcggattcgcccgcgacgccgagctgtctgaagccacc
ggagagaccgtgctcgagctgcccggccggcagccgcgcggctacgccggtgacgtcgag
gcgatcctcactgatgtgcgcgccctcgtccacgacagctgggacgtctgcgtcctcacc
gaaggccgcggaccgggtgagcggatggtcgaggtgttctccgacgccgatgtgccggcc
cggttcgtcgacgatctcaccgagcccaccacctcgggcgcggtgaccgtgaccacggca
gccgacttcggcgggttcgtcattggcgagatgacgctcgccgtcctcaccgaggccgat
gtgctcggccgcgccgcagccacctcgacccgggacatgcgccgcctgccggcccgccgc
cggcgccaccaggtcgacccgctcgacctcaagcccggcgactacgtcgtccacgagcag
cacggcgtcggccggttcgtcgagatggtcgcccgcacgatgggccgcggcgagcaggcc
cacacccgcgaatacctcgtcatcgaatacgcgccctccaagcgcggccagcccggcgac
cggctctacgtgccctcggactcactcgaccaggtcacccggtacgtcggcggggagtcg
ccgtcggtgaacaagatgggcggttcggactgggcgaagacgaagtcgaaggcccgcaag
gccgtcaaggagatcgcccgcgagctcatccacctgtactcggcccgccgcgcctcctcc
gggcacgccttcggcccggacaccccatggcagcgggaactcgaagacgccttccactac
atggagacccccgaccagctcaccaccatcgacgaagtcaaagccgatatggagaagccg
atcccgatggaccggctcatctgcggtgacgtcggctacggcaagaccgaggtggcggtg
cgcgcagcattcaaagcgatccaggacggcaagcaggtcgcggtgctcgtgccgacgacc
ctgctcgtccagcagcacttcgacaccttctccgaacgctactccggcttccccgtcacc
gtcggcaagctctcgcgcttccagtccccggccgattccgagaagacgaagcaggacctc
aaggccggcagcctcgacctcgtcatcggcacccaccggctgctttccggtgaggtgcag
ttcaagaacctcgggctcgtcatcatcgacgaggagcagcgtttcggcgttgagcacaag
gagacgctcaaggcgctgcggaccaatgtcgacgtgctagcgatgtcggcgaccccgatt
ccgcgcaccctggagatggcggtgaccgggatccgggagatgtcgacgcttgcgaccccg
ccggaggaccgccacccggtgctgacctacgtcggcaggtacgaggaccggcaggtgact
gcggcgatccgccgtgagctgctgcgcgagggccaggtcttcttcatccacaaccgcacc
caggacatcgagaagaccgccgcccacttagccgagctcgtcccggaggcgcgcatcgcc
gtcgcccacggcaagatgagcgagcagcgcttagagcaggtcatcgtcgacttctgggag
aagcgctacgacgtgctcgtgtgcacgacgatcgtcgagaccggcatcgacatctcgaat
gccaacaccctcatcgtcgaccgcgccgaccggatgggcctgtcccagctgcaccagctg
cgcgggcgggtcggccgctcgcgtgagcgcgcctacgcctacttcctctatccagccgac
atgacgctgaccgagaccgcccacgaccggctgcagaccgtcgccgcccataccgagctg
ggtgccgggatgcaggtggcgatgaaggacctcgagatccgcggggccggcaacctgctc
ggcggccagcagtccgggcacatcgaaggcgtcggcttcgacctctacgtccggctcgtc
ggcgaagcggtcgcgaacttccgcggcgaaggcgaagaagaggtcgccgagatgcgcatc
gaattgcccatcgacgcccacctgccgaccgactacgtcgaacacgaacgcctccgcctc
gaggcctaccgcaagcttgctgcggccaccgacgacgccgagatccgcgaggtgctggcc
gaactcaccgaccgctacggcccctaccccgaggcggtcgaggtgctcgccgagatcgcc
cgcctgcgcatccgggcgcgtgcctccggtgtgcaggagatcctgtcggtgggcaacacg
atccgcttcgccccggtcgagctggccgattcgcagattgtgcggctcaagcgcctgtac
ccgaagtcgctcatcaaaccggccctgcgcgccatccaggtgcccaagccgcagtccggg
gtcgggttcgacaagaaggacctcgtcgaccgggagctcatcgactgggtgcaccagttc
ctcgacgcgatcctgcccgctcccgaggcggaggccgggtctgcagacgagaccggctct
gcagacaaggccgagtctggggagaaggccggcgcgaaggcggagtcgaacgcatga
DBGET
integrated database retrieval system
