Bombyx mandarina (wild silkworm): 114240604
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Entry
114240604 CDS
T05882
Name
(RefSeq) nuclear pore complex protein Nup214-like isoform X1
KO
K14317
nuclear pore complex protein Nup214
Organism
bman
Bombyx mandarina (wild silkworm)
Pathway
bman03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
bman00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
114240604
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bman03019
]
114240604
Messenger RNA biogenesis [BR:
bman03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
114240604
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleoporin_FG
ANAPC4_WD40
WD40
Motif
Other DBs
NCBI-GeneID:
114240604
NCBI-ProteinID:
XP_028027005
UniProt:
A0A6J2JBY4
LinkDB
All DBs
Position
Unknown
AA seq
1826 aa
AA seq
DB search
MESKYGPNSIDEPNLLYKLQHKTKVFNTTEKLSNRGYNLVACSSKYGIVFIAAPDGTLSV
YSLKQLMSNETQHTNVKLQECATHIAVSCDDELLAVAGSQSLSVFKVTDFQNQNVSPSIF
MKTNVNPSTFVSALQWNPCIPDSLALAFQDGTLLACQVTTNQVKKVQTKARCICWSPKGK
QLVTGNNDGTLCQYKPDLTLAKTIPAPMLPEGSSIEALAVYWISTFQFAVVYKSIGDDSR
PSVTIVNAGKTGQPTCLNYEDVCFSMGSIRPWYYFLLGIAQWNIILASSSNSMEIATLAS
TDGSNWIQWCQTDEGRPELPLTDKKLENYPVGIAIDTCAIQQLPWGENETLPYMPSLLIV
SQSGLLTIFNIVNLNRGAPQVCAPPQQFTLPASSLTSEIPGETPGETSTVSIVQPKPQVI
QQAPAPQPIQQQPNPSASVPAVSNFAAQPQLPTSGLSASNVIKVPKPQFTSMFGSAATNQ
NSQAMPEKKSPPPSQQQQLQPLSQPKPPAAANQTIHQPQPKPAVAPTPQSPQIQENAALK
EEQERINKMKANQELKNMLVKEVNDFQMELYKFMVKTRETQVKLQRDIESISANFNFTSL
DSEQLKKDCSLEDLRGAIIQLKLELVRTCALVAEARTHANTKDLQQWTQADPLTIKKVAS
VKKLAYYVQNQLEQAQKALDYKWNEIVENDPNAKQGKYMIRPRLDDVYQPLVKQQEILSR
QQTVLRNLRNALKECDILPLSKSPSLLRSTPFRNKDPLSKLTKNILNMSIEPETKTKKPL
LTPQKYDALRDMLSNHKIVKIKPVDIEMGHHLATMRSKYEKSMQEKAQQATSAEKYVNKE
VQVKIEPVEESVPLKDVIKAEPKMETKQFTETVAPFSPIQSKPSVPGLQNVTRTLFTEPK
PEEPRVRIPVESFNFTGVCYAPPPFSYTSPVPNMSSNQTPNNDLKQFMGQKICSPISPFS
NQPATAESLVPANKSTANLGLSQNSLSSSAQTQPVVFEPKPVTVASVKSSETGEPEGAAK
PADSKKVNKPITNLFGMKPTTPFAPTISNVPDVLKSHQEVPNTEVRAVVKHNENAIEKPK
ENIAAKVNDESKVVQKIAEKENVPKTFVPQIVKPSPLIPVVQPVATSSNVLTTQTIPIKL
EMKSETAKQPDTPATSSTTSIFSAVNESSKLIAASTTSPIQPKPDVPTKDELSTETNTAS
PATTSAVSIFGTAVASQPKTTASSSIFSTATPFSVTTQNSIFGGSATGSIFGTPPATTSE
SPKPLVLSAPKPVTSVFGTPVPVSTAVPSAGVTTTSTVAATTTSTAAATTSSTVAFASST
SSVFSASATTQSSTLSPTTASSIFGTSAVTTQASAFGTPTTTASVFTPTTSAPSLFGTAT
TTTQRVFGSAASDTQASSIFGAAANQSSVFGQPSSQASVFGTPTSAAPAAAFGSPSQTTQ
TSLFGTATPTTSASVFGAQTTQPSLFGSPTQTSQASVFGTPSQNKASVFGTPAVTQTSVF
GSSTQPAQTSVFGTNTQTTQASIFGTPTSTTQASLFGTPTTAAQSGSLFGGGESNLFAAA
SISTTSAASPTAGGNIFGGSSGSIFGSSGSNVFGGSTTFGQSNSSASSIFGSRTTFGDKP
ATNLWGSGNAAGNTGFGTTGFGQQATTQSSSIFGNSSGGSFSSPQSGQAFGGTQQTSPFG
SAETKPSVFGSPQQQAAPGFGSPAAFGSKPTFGQSAGFGSPTGSGFGSFGGFNKSPNSGF
GAPASFGSGSVFGGTPAFGNTSPGKMFGGMASPISGFGSTQSNSTFENLATQNTLTFGNL
AQQSGQQQQQQAPSFNTSPSFTGWRG
NT seq
5481 nt
NT seq
+upstream
nt +downstream
nt
atggaatcaaagtatggaccaaattctattgatgaaccgaatttgttgtataaattgcaa
cacaagacaaaagtatttaacacaacagaaaaattgtcaaatcggggttacaatttggtg
gcctgtagcagcaaatatggcattgttttcattgctgctcctgatgggacactttcagtc
tattccctaaaacaactgatgtctaatgagacacaacatacaaatgtgaagcttcaagag
tgtgctacgcatattgctgttagttgcgatgatgaactacttgcagtggctggttcgcag
tccctttccgtgtttaaagtcacagactttcagaatcagaatgtatcaccatcaatattt
atgaagaccaatgtgaatccatcaacatttgtatcagcattacaatggaacccttgcata
ccggactctttagcattagcattccaagatggtaccttacttgcctgtcaagttaccaca
aaccaggtcaagaaagtacaaacaaaagcgagatgtatttgttggagtccaaaagggaaa
cagttggtgacaggtaacaatgacgggacactgtgtcagtacaaaccagacttgactctt
gcaaaaaccataccagctccgatgttacctgaaggatcgtcaattgaagcattagctgtg
tattggatatccacttttcaatttgctgtcgtttataaaagtattggcgatgacagccgg
ccatcggtaacaattgtgaatgctggaaagacgggacaacctacttgcctcaattatgaa
gatgtatgtttcagtatgggctctatcaggccgtggtattattttctacttgggatagca
caatggaatattattttagcttcatcatcaaacagtatggaaatagcaacgctggcatcg
actgacggttccaactggatacagtggtgtcaaacagacgaaggcagaccagagctacca
ttgacagacaagaaattggagaattatcctgtgggaatagctattgacacatgtgccata
caacaactgccttggggtgagaatgaaacgcttccatacatgccgtccctgctgatcgtt
tcacaatctggtcttctaacaatattcaatattgtgaacttgaatcgaggagcccctcaa
gtttgtgccccacctcagcaattcacgttacccgcatcatcgttaacgagtgaaataccg
ggcgaaacaccaggagaaacttcaaccgtatctatcgtacagcccaagcctcaagtaatc
caacaagctccggcccctcagcccattcaacaacaaccgaatccatcagcatctgttccc
gctgttagcaattttgcagctcagccccaactcccgacaagtggcttgagtgcatccaat
gtaataaaagtaccaaaaccgcaattcacttcaatgtttggatcggctgcaacgaatcaa
aatagtcaagcaatgccagaaaaaaaatcaccaccgccctcacagcaacagcagcttcag
cctttatctcaacccaaaccaccagctgcagcgaaccaaacaatacaccaaccgcagccc
aaaccggcagtggctccaactcctcaatcccctcagatacaggagaacgctgcgctaaaa
gaagaacaagagagaatcaataaaatgaaagctaaccaagaattaaagaacatgctcgtt
aaagaagttaacgatttccaaatggaactgtacaagtttatggttaaaacgagggaaact
caagttaagcttcaacgcgacatcgaatctataagtgcaaatttcaatttcacttcgcta
gactctgagcagctcaagaaagattgttcactggaagacttaagaggtgcgataatacaa
ctaaaattggagcttgtccgcacctgcgctctagtcgcagaagcccgtacacatgctaac
accaaagatctacaacaatggacgcaagcggatccgctgacaataaaaaaagttgcatca
gtgaagaaacttgcttattacgtgcagaatcaactggaacaagcacagaaagcgctggat
tataaatggaacgaaatagtcgagaatgatccaaacgccaaacagggaaagtacatgata
cgcccaagactggacgacgtgtaccagccgctggtgaagcaacaagagatcctgagccga
caacagaccgtgctaaggaacctgcgtaatgcactcaaggaatgtgacatattaccgtta
agcaaatctccgtcgttgttgagaagcactccttttaggaacaaagatcctctctcgaag
ttaacgaagaacatattgaatatgagcatagaaccggaaacgaagacaaagaagcccctg
ctcacgccgcaaaagtacgacgctttaagggatatgctatcgaaccataaaatagttaaa
ataaagccagtagacattgaaatgggacatcacttggcgacgatgcggtctaagtacgaa
aaatctatgcaggaaaaagctcaacaagcaacaagcgcggaaaaatacgtaaacaaagaa
gtgcaagttaaaattgaacctgttgaagaaagcgtgccccttaaagatgttattaaagct
gaacctaaaatggaaacaaaacaatttaccgagacagtagcgccgttctcgcccattcag
agcaaaccctcagtaccgggacttcaaaacgtcactagaacattgtttaccgaaccgaag
cccgaagaaccgcgagttagaattcctgttgaatcttttaattttactggagtttgctat
gcaccacccccattctcatacacatcgcctgtacctaatatgtcttcaaatcaaacgcct
aacaatgacttgaagcaattcatgggacagaaaatatgctcacctatttctccgttctca
aatcaaccagctactgcggaatcgttagtgccggccaataagtcgacagcgaatcttgga
cttagtcaaaatagcttgtcttcgagtgctcaaacacagcctgtggtttttgaacccaaa
cctgtgactgtcgcttctgtgaaatccagtgaaaccggcgaacctgaaggtgcagcaaaa
ccagccgacagcaagaaggttaataaacctattaccaacctgtttggtatgaaaccaact
accccatttgcacccaccatctctaatgtaccggacgttttgaaaagtcatcaagaagta
ccgaatacagaagtgagagccgtcgtgaagcacaatgaaaacgcgatagaaaaaccaaaa
gagaacatagcggccaaagtcaacgatgaatctaaagtcgttcaaaagattgccgaaaaa
gaaaatgttcctaaaacgtttgtcccgcaaatagttaaaccgtcaccgctgataccggta
gttcaaccagttgcaacaagttcgaatgtactaacaacgcagaccattccgattaagcta
gaaatgaaatctgaaacagccaagcagcctgatactccagccacatctagtacaacttcg
atattcagtgccgtgaacgaatcttccaagctaatagccgcttcaactacttcaccgatc
cagccgaaacctgatgtgcctacaaaggatgaactttcaacagaaactaacactgcatca
ccagcgacgacttctgctgtctccatttttggaacagccgtcgcatcacaaccaaaaact
acagcatctagctcaatattcagtacagctacgccttttagtgttacaacacaaaattct
atatttggaggatctgcgacgggttccatatttgggacaccaccagccacgaccagtgag
tcaccaaaaccgttggtgcttagcgcaccgaaaccggtcacatcagtattcggaacgcct
gtacctgtatcgaccgcagtacctagcgcgggtgtgacaacgacctcaactgtggcagca
acaacgacctcaactgcggcggccacaacgtcttcaactgttgcctttgcctcatcaaca
tcatcggtattttcggcgtccgcgaccacacagtcgtcaacacttagcccgacaactgca
tcttcgatattcggaacgagcgcagtcacaacccaagcttcagctttcggcacgcccacg
acaactgcgagtgtgttcacgcctaccacaagcgccccatctctattcgggactgcgact
acaacgactcaaagggtattcggtagcgctgcatcagacacacaagcctcgtccatattt
ggagctgcggcgaatcagtcatcagtgtttggccaaccttcgagccaagcgtcggtgttt
gggacgccaacctcggctgcaccggctgcggcatttggatcgccgagccaaacaacacaa
acatcgttgtttggcactgcgacgccaacgacttcggcgtccgttttcggcgcccaaacg
actcaaccgtccttgttcggtagtccgactcagacgagtcaagcctctgtgtttgggact
ccgtcgcaaaacaaggcctccgtgttcgggacccccgctgtcactcagacctcagtgttt
ggtagctccacccagccagctcaaacatctgtgttcggtactaacacgcaaacgacgcag
gcgtctatattcggtactccgacgtctacaactcaagcatcgttattcgggactccgacg
acggcggcccagagcggatctctgtttggaggcggtgaatctaatttatttgcagccgca
agtatctcgactacaagcgctgcgtctccgaccgccggtgggaatatatttggagggtcg
tcggggtctattttcggtagcagcggttctaatgttttcggaggcagtacaacctttggt
cagtcaaattctagtgcgtcttcgatattcggcagcaggactacgtttggagataagccc
gctacgaatttgtggggatccggtaacgccgctggcaacactggctttggcacaactgga
tttggtcaacaggcaacaacacagagctcatctatatttgggaacagttcgggaggtagc
ttcagttcgcctcagtccggccaagccttcggtggcacccaacagacttcgccattcggt
agcgccgaaactaagccttcagttttcggatctccgcaacagcaagcggctcctggcttt
ggtagccctgctgcattcggttctaagccaacattcggtcagtctgctggttttggttct
cctacgggtagtggctttgggtctttcggtggattcaacaaaagcccgaacagcggattc
ggggcgccggcttcgttcggttctggaagcgtgttcggcggcactcccgcgttcgggaac
acctcccccgggaaaatgtttgggggaatggccagtcctatatcaggtttcgggtctaca
cagtcgaactcgactttcgagaatttagcgacgcagaacaccctcacgttcggtaatcta
gctcagcaatctggtcagcagcaacagcaacaagctccaagtttcaatacgtctccatcg
ttcactggctggcgcggctaa
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integrated database retrieval system
