Bombyx mandarina (wild silkworm): 114244131
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Entry
114244131 CDS
T05882
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46 isoform X1
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
bman
Bombyx mandarina (wild silkworm)
Pathway
bman03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bman00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114244131
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bman03041
]
114244131
Enzymes [BR:
bman01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
114244131
Spliceosome [BR:
bman03041
]
Complex A
U2 snRNP components
U2 related factors
114244131
Complex B
114244131
BRITE hierarchy
SSDB
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Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CdAMP_rec
Motif
Other DBs
NCBI-GeneID:
114244131
NCBI-ProteinID:
XP_028031648
UniProt:
A0A6J2JQU5
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All DBs
Position
Unknown
AA seq
1018 aa
AA seq
DB search
MVRSGRDRDRERDRRRSRSRSDTPDRKRRRSRSRSRDRGSKSSKRKRSRSRDRDSKRDRS
RERDRSRERDRSRERDRDRKSDKRDDKRNGSSKSSRKKSPEKERERSKSKEKSNKADSSE
YNPGSVDKEEEQNRLEAEMQKRRERIERWRAERKRKEIESAKKEVQKGSIVTNIQIPTSK
KWSLEDDSGDEALPGEDAEGKEKNNIGEKKEEEDEIDPLDAYMQEVQQEVRKVNQMDQAK
GIISVPTTGGTGIVILTGTAKKKVTEQKNKGELIEQNQDGLEYSSEEETEDIKDAAANLA
SKQRKDLIKVDHASLDYMQFRKSFYTEVNELARMTPEEVETYRTELEGIRVKGKGCPKPI
RTWAHCGISKKELDILKKLNFEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTLAFILPMF
RHVLDQPALEDTDGPIALIMTPTRELCMQIGKDIKKFAKSLGLRVVCVYGGTGISEQIAE
LKRGAEMIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMKIIDNIR
PDRQTVMFSATFPRQMEALARRILQKPIEIQVGGRSVVCKDVEQHVAILEEEAKFFKLLE
LLGLYSQMGSIIVFVDKQENADSLLKDLMKASYSCMSLHGGIDQFDRDSTIVDFKNGKVK
LLVATSVAARGLDVKQLVLVVNYDCPNHYEDYVHRCGRTGRAGNKGFAWTFLTPEQGRYA
GDVLRAFELAGVSPPAELKNLWEKYKEAQEKDGKKVHTGGGFSGKGFKFDESEAQAASEK
KKYQKAALGLQDSDDEDVEGDLDQQIETMLAAKKIVKEIKPGVAVSGPAAAAASATDGKL
ELARRLASRINLAKGLGADQKGATQQAAEAILKGAPSQTLITAKTVAEQLAAKLNTRLNY
QPRDDNTNEPTEEVFRKYETELEINDFPQQARWRVTSKEALALISEYSEAGITVRGTYVQ
PGKAPPEGERKLYLAIESSQELAVAKAKSEITRLIKEELLKLQTSAHHMVNKARYKVL
NT seq
3057 nt
NT seq
+upstream
nt +downstream
nt
atggttaggagtgggagagaccgtgatagggaaagggatcgacgtagatctcgtagtcgt
tctgacacaccggatcgtaaacgaaggaggtcaagatcaagaagtcgtgatcggggctcg
aaatcttcaaagaggaagcgcagtcgtagcagagatcgtgactccaaaagagaccgaagt
cgagaacgggatcgcagtagggaaagagatcgtagtcgtgagcgagatcgggacagaaaa
agtgataaaagagatgataaaagaaatggatctagtaaatcatcgagaaagaagtcgccg
gagaaggaaagggagagatcaaaatcaaaggaaaagagtaataaagctgattcttctgaa
tataacccgggctctgttgacaaggaagaagagcaaaaccgcttggaagctgaaatgcaa
aaacgtcgtgaacgtatagagagatggagggctgaacgtaaacgtaaagaaattgaatcc
gctaaaaaagaagttcaaaaaggaagcattgttactaatatacaaataccgacatcaaag
aaatggtcacttgaagatgactctggtgatgaagctttgccaggtgaagatgcggaagga
aaagaaaaaaacaatataggagaaaagaaagaagaagaagatgaaattgatcctttggat
gcgtacatgcaagaagtgcaacaagaagtgcgtaaagtcaatcaaatggaccaagccaaa
ggaattattagtgttccaacaacaggtggcactggcattgtaattcttactggcactgcc
aaaaaaaaggtcactgagcagaaaaataagggtgaactgatagaacaaaatcaagatggc
ttggagtattcgtctgaagaagaaacggaagacataaaagatgccgctgctaatcttgct
tccaaacagaggaaagacttgatcaaagtagaccatgctagtttagactacatgcaattt
aggaagtcattttacacagaagtgaatgaactagcaagaatgacaccagaggaagtagaa
acgtacaggactgagttggaaggtattcgtgtcaagggaaaaggctgtccgaaaccgatc
aggacatgggcgcattgcggtatcagtaaaaaagaacttgacattctaaagaagttgaat
tttgaaaagcccaccccgatacaagcacaagcgattcctgctattatgtctggaagagat
ctaataggaattgcgaagactggttcaggcaaaacattagcgtttatcctgccaatgttc
cggcacgtgttggaccaaccggcgttagaagatacagacggaccaatagccctcataatg
actcctacaagggaactctgcatgcagatcggcaaagatataaagaagtttgcaaagtca
ctcggattacgtgtggtttgcgtttacgggggcactgggatatcggaacagatagccgaa
ctgaagcgtggtgccgaaatgatagtgtgcaccccgggacgcatgatcgacatgttggcc
gccaactctgggcgcgtcaccaacctgcgccgcgtcacgtacgtcgtgctcgacgaggcc
gacagaatgtttgacatgggattcgaaccacaggtaatgaaaatcatagacaacataaga
cccgacaggcagaccgtgatgttcagcgcaaccttcccgagacagatggaggctctcgct
cgtaggatattgcagaagccaatcgaaatacaggttggtggaagaagtgtggtctgcaag
gatgtggaacagcacgtcgctatactagaggaagaagctaaattcttcaaactgctggaa
ctcctcggactctacagtcaaatgggaagcatcattgtctttgtggacaaacaggagaac
gccgacagtctgttaaaagacctcatgaaggcttcgtattcttgcatgagcttacacgga
gggattgatcaattcgacagggactcgacgatagtagacttcaagaacggcaaggtcaag
ttgctggtagcgaccagcgttgctgcccgagggctggacgtcaagcaactagttctggtg
gtcaactacgactgcccgaatcactatgaagattatgtgcatagatgtggacgcaccggg
cgcgccggcaacaaaggatttgcatggaccttcctcactccggagcagggtcggtacgcg
ggcgacgtgctcagggccttcgagctggccggagtcagtcctcccgccgaactaaagaac
ctgtgggagaagtacaaggaggcgcaggagaaggacgggaagaaggtgcacacgggaggc
ggatttagtgggaaaggtttcaagtttgacgaatctgaagcccaggctgcttcggaaaag
aagaagtatcagaaggcggctctcggccttcaagactccgacgacgaggacgtggaggga
gatctcgatcaacaaatcgagacgatgctcgctgccaagaagattgtcaaagaaattaaa
ccgggcgtggccgtgtccggtcccgccgcggctgctgctagcgcgacggacggaaagctg
gagttagcgcggcggctcgcgtcccgcatcaacctcgccaagggactcggcgcagaccag
aagggcgccacgcaacaagccgccgaggcgatcctcaagggcgcgccttcgcagacactc
atcacggctaaaacagtggcggaacagttggccgcgaagttgaacacgcgactcaactac
caaccgcgagacgacaacacaaacgaaccgaccgaggaggtgttccgcaagtacgagacc
gagctggagatcaatgacttcccgcagcaggccaggtggagggtcactagcaaggaggcg
ctagctctaatcagcgagtattcagaggccggtataacagtgcgcggcacgtacgtccag
ccgggcaaggcgccgcccgagggcgaacgcaagctgtacctcgccatagagagctcgcag
gagctggccgtcgccaaagccaaatccgagataacgcggctcatcaaggaagagctcctc
aaactccagacctcggcccatcacatggtcaacaaagctagatataaagttttgtag
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