Bermanella marisrubri: HF888_03400
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Entry
HF888_03400 CDS
T06527
Name
(GenBank) lipopolysaccharide biosynthesis protein
KO
K10107
capsular polysaccharide transport system permease protein
Organism
bmar
Bermanella marisrubri
Pathway
bmar02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
bmar00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
HF888_03400
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bmar02000
]
HF888_03400
Transporters [BR:
bmar02000
]
ABC transporters, prokaryotic type
ABC-2 type and other transporters
Capsular polysaccharide transporter
HF888_03400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Wzz
FOXP-CC
ATG14
Succ_DH_flav_C
Motif
Other DBs
NCBI-ProteinID:
QIZ83331
LinkDB
All DBs
Position
748793..749992
Genome browser
AA seq
399 aa
AA seq
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MSEPAKQLSSFQRKARKLQRDPKQFFVDSKAYVSTRKAAYIAWAKLGSFAIVLLASLLVV
TYYGIVASPRYVSETQFVVKQAGSNEAALMGIAAIATTSSSSRDALIIKEYVLSREMAIK
LDEKIALKEHYANSEWDFFSRLSKDATIEEYVEFYKNRITVRHDELSDILYIEVQAYTND
FALLLGQEVLQQSEAFINTLGDKMAQEQLIYAKKEVERLHNNMKVQQQRLLTFQNSNQLY
SPEQQGSALLTAIGTLQSEVIQAEAKLKEMQSVMHDDAAEVRSQKNLISSLKQQLSEEKA
KLTSEDQVSLNKVNAQYQEIKLNTELAAAMYQSALSGMETVRSDAYRKLKHLLVIQHPRQ
PQEDKYPRRIYSIVTWFVSLLLIYFLGRLVWTIIKEHKD
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagccagctaagcagcttagtagttttcagcgcaaagcgcgtaagctacaacgc
gatccaaaacaattttttgtggatagtaaagcctatgtcagtacacgtaaggccgcatat
attgcttgggcgaaactaggttcatttgccattgtattactagcatcactcttagttgtt
acgtattacggcatagtagccagcccaagatatgtcagtgagactcagtttgttgtaaag
caagctggcagtaacgaagcggcattaatgggaatcgctgctattgctaccacgtcttcc
tcttctcgtgatgcactgataataaaagagtatgttttatcgagagagatggcgatcaag
cttgatgagaaaatcgcattaaaggaacactatgcaaactcagaatgggatttcttcagt
cgcctatctaaagacgccaccatcgaagaatacgtagagttttataaaaaccgaataact
gtccgtcatgacgagctatccgatattttatatatcgaagtgcaagcctataccaatgat
tttgcccttctgcttggtcaggaagtactacagcaaagcgaagcttttattaatacgctt
ggcgataaaatggcccaagaacagctaatttatgcaaaaaaagaggttgagcgattacat
aataatatgaaagttcagcagcaacgcctgcttaccttccagaacagtaatcaattgtat
agcccagagcaacaaggtagcgcacttctgactgccattggcacactgcagagtgaagta
atacaagcggaagcaaagttaaaggaaatgcagagtgtcatgcatgacgacgcagcagaa
gtgagaagtcaaaagaacttaatctcttcactaaagcaacagctatcggaagagaaagca
aagcttacttcggaagatcaagtctcattgaataaggtgaatgcacagtatcaagaaatt
aaattaaatactgaacttgcagccgccatgtatcaatctgcactttccggtatggaaaca
gttcgttccgatgcttatcgcaagttaaagcacttactggtcatacagcacccacgtcaa
ccgcaagaagataaatatccaagacgtatatacagcatcgtcacttggtttgtttcacta
ttgcttatctattttttgggtcgcctagtatggacgattattaaagaacacaaggattaa
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integrated database retrieval system
