Brevundimonas mediterranea: GYM46_02880
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Entry
GYM46_02880 CDS
T06564
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
bmed
Brevundimonas mediterranea
Pathway
bmed03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bmed00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GYM46_02880 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bmed03400
]
GYM46_02880 (xth)
Enzymes [BR:
bmed01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
GYM46_02880 (xth)
DNA repair and recombination proteins [BR:
bmed03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
GYM46_02880 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
QIH72002
UniProt:
A0A6G7EF98
LinkDB
All DBs
Position
576761..577558
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AA seq
265 aa
AA seq
DB search
MRIATWNVNSVNARLPTVLAWLEQAAPDVACFQEIKCVDEKFPREAFESLGYNVETHGQK
SYNGVALLSKYPLSDIRRGLPGDETDEQARYLEAVIEAPRPLRVASIYLPNGNPIGTEKF
DYKLAWFERLNRHARDLLAFEEPLALCGDYNVIPEAEDAKNPAAWTDDALFQPQSRQAFR
ALKNLGLADSHEVGGEPAGTYSFWDYQAGAWQRNHGIRIDFALLSPQAADRLRGVETHRD
ARDMDKPSDHVPVVVDIDLSAGTEA
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcgccacctggaacgtgaactcggtcaacgcccgcctgcccaccgtgctggcc
tggctggagcaggccgcccccgacgtcgcctgtttccaggaaatcaaatgcgtggacgag
aaattcccgcgcgaggccttcgagagcctgggctataatgtcgagacccacggccagaag
agctacaacggcgtggccctgctgtcgaaatacccgctgtcggacatccggcgcggcctg
cccggcgatgagaccgatgaacaggcccgctatctggaagccgtgatcgaggcgccccgg
ccgctccgggtggcgtccatctatctgcccaacggcaatccgatcgggaccgagaagttc
gactacaagctggcctggttcgagcgattaaaccgtcacgcccgcgacctgctggccttc
gaggagccgctggccctgtgcggcgactataacgtcatccccgaggctgaggacgccaag
aaccccgccgcctggaccgacgacgccctgttccagccccagagccgacaggccttccgc
gccctgaagaacctgggcctggccgactcccacgaggtcggcggggagccggccgggacc
tacagcttctgggactatcaggccggcgcctggcagaggaaccacggcatccgcatcgac
ttcgccctgctgtcgccccaggccgcggaccggctgcggggggtcgagacccatcgcgac
gcgcgcgacatggacaagcccagcgatcatgtgccggtggtggtcgatatcgacctgtcg
gccgggacggaggcctga
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