Brevundimonas mediterranea: GYM46_13130
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Entry
GYM46_13130 CDS
T06564
Name
(GenBank) ATP-grasp domain-containing protein
KO
K01968
3-methylcrotonyl-CoA carboxylase alpha subunit [EC:
6.4.1.4
]
Organism
bmed
Brevundimonas mediterranea
Pathway
bmed00280
Valine, leucine and isoleucine degradation
bmed01100
Metabolic pathways
Module
bmed_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
bmed00001
]
09100 Metabolism
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
GYM46_13130
Enzymes [BR:
bmed01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.4 methylcrotonoyl-CoA carboxylase
GYM46_13130
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
Biotin_lipoyl
Dala_Dala_lig_C
ATP-grasp
HlyD_3
Biotin_lipoyl_2
GCV_H
Motif
Other DBs
NCBI-ProteinID:
QIH73808
LinkDB
All DBs
Position
2692554..2694518
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AA seq
654 aa
AA seq
DB search
MFKSVLVANRGEIACRVFRTAKRMGLRTIAVYSEADAQALHVREADEAVRIGPAAARESY
LDGAKVLAAAKATGAEAIHPGYGFLSENADFAEAVAAAGLIWIGPDPASIRAMGLKDAAK
ELMIQAGVPVTPGYQGADQSEATLTAEAARIGYPVLIKAVAGGGGKGMKRVDDPADFAAG
LASAKREGAAAFGDDRVLIERYITRPRHIEVQVFGDRHGDVVHLFERDCSLQRRHQKVIE
EAPAPGMSEAVRAAVTGAAIKAAKAVNYVGAGTIEFIADASDGLKADGIWFMEMNTRLQV
EHPVTESVTGVDLVEWQFRVAAGEPLPLKQDQIKLNGWAMEARLYAEDPANGFLPSIGRL
EHFVMPDGIRVDTGVEQGGEVSQFYDPMIAKLIVHEDTREAAAARLAEAAGEVEVWPVKT
NAGFLKRCLDHPRFVTGDVDTGFIAAEEAALQPVETAEATLAALTLIAEAASDGEAAGSD
RFSPWGGQPGLSYGVRLNAPAQTMVWAHVDGRGVSGAVTPVEAGWRGAEGRTAQIGFDQV
QAGEALFGYQVIDDGFVLFVDGEARRVTPHRAAVGSGAGAVSDGALRAPMPGKIVAVPAK
AGDVVAKGQPVVVLEAMKMEHALTAPFDGVVEHVAAVGDQVVEAAVLAVVKAAD
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atgttcaagtccgtcctggtcgccaatcgcggcgaaatcgcctgtcgtgtcttccgcacc
gccaagcggatggggttacgcaccatcgccgtctattccgaggccgacgcccaggccctg
catgtgcgcgaggccgacgaggcggtgcggatcgggccggcggcggcgcgcgagagctat
ctggacggcgccaaggtgctggcggcggccaaggcgacgggggcggaggcgatccatccc
ggttacggattcctgagcgaaaacgcggactttgcggaagctgttgcagcggcgggtctg
atctggatcggaccggacccggcctcgatccgggccatggggctgaaagacgcggccaag
gaactgatgatccaggccggggtgccggtgacgccgggctatcagggcgcggaccagtcg
gaagcgaccctgacggccgaggcggcgcggatcggctatccggtgctgatcaaggcggtg
gcgggcggcggcggcaaggggatgaaacgggtcgatgatccggccgatttcgccgctggt
ctggccagcgccaagcgcgagggggccgcggccttcggcgacgaccgggtgctgatcgaa
cgctacatcacccgcccgcgccatatcgaggtgcaggtgttcggggatcggcacggggat
gtggttcatctgttcgagcgggactgttcgctgcaacgccgccaccagaaggtgatcgaa
gaggcgccggcgccgggcatgagcgaggccgtgcgggccgccgtgacgggcgcggcgatc
aaggcggccaaggcggtcaactatgtcggggccgggaccatcgaattcatcgccgacgcc
tcggacgggctgaaggcggacgggatctggttcatggagatgaacacccggctgcaggtc
gagcatccggtgacggaaagcgtgaccggcgtcgatctggtcgaatggcagttccgcgtg
gcggcgggcgagcccctgccgctgaagcaggatcagatcaagctgaacggctgggccatg
gaggcgcgcctctatgccgaggatccggcgaacggtttcctgccgtcgatcgggcggctg
gagcatttcgtcatgccggacggaattcgcgtcgataccggcgtggaacagggcggcgag
gtcagccagttctacgatccgatgatcgccaagctgatcgtgcatgaggacacgcgcgag
gcggcggcggcgcggctggccgaggcggcgggcgaggtcgaggtctggccggtcaagacc
aatgcgggcttcctgaaacgctgtttggaccatccgcgcttcgtgacgggggatgtggat
acggggttcatcgcggcggaggaggcggcgctgcagccggtcgagaccgccgaggcgacg
ctggcggccctgaccctgatcgcggaggcggcgagcgatggagaggcggccgggtctgac
cggttcagcccctggggcggccagccgggcctgtcgtatggggttcgtctgaacgcgccc
gctcagacgatggtctgggcgcatgtggacggccggggcgtgtctggggccgtgaccccg
gtcgaggcgggatggcgcggcgccgagggaaggacggcccagatcggattcgaccaggtg
caggccggcgaggcgctgttcggctatcaggtgatcgatgacggcttcgtcctgttcgtg
gacggcgaggcgcgccgggtgactccgcatcgcgccgccgtgggctcaggcgccggagcg
gtctccgacggcgcccttcgcgcccccatgcccggcaagatcgtcgccgtacccgcgaag
gcgggtgacgtcgtcgccaagggccagcccgtcgtggtgctggaggcgatgaagatggag
catgccctgacggcgcccttcgacggggtcgtcgagcatgtggcggctgtgggcgatcag
gtggtcgaggcggcggttctggcggtggtgaaggcggcggactaa
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