Botrimarina mediterranea: Spa11_21930
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Entry
Spa11_21930 CDS
T09862
Name
(GenBank) Carbohydrate-selective porin, OprB family
KO
K07267
porin
Organism
bmei
Botrimarina mediterranea
Brite
KEGG Orthology (KO) [BR:
bmei00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bmei02000
]
Spa11_21930
Transporters [BR:
bmei02000
]
Other transporters
Pores ion channels [TC:
1
]
Spa11_21930
BRITE hierarchy
Motif
Pfam:
OprB
Motif
Other DBs
NCBI-ProteinID:
QDV73994
LinkDB
All DBs
Position
complement(2719058..2720293)
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AA seq
411 aa
AA seq
DB search
MRISHIARSLALAAASVGSGQALAQEPLTGDWYGNRTYLADNGVTFQFDVAQFYQGVTAG
GLNQHFKYGGHGDYVTNVDFGKLGVQEGLFLKVRAEHRFGENINGDTGAFLPASVLTALP
VADSEELYLTNVLFTQALSERFAVFAGKLDTLDGDLNAFAHGRGKTQFSNVGFVTNPALL
RVVPYSTLGCGFAVLGDEGEPVFSYMLLNSEDTAKTSGFSELFNDGVAMAAELRLPTEFY
GLPGHQLVGAAWNNREFTSLGQDPRVVLPDIPVAQASDAWAVYWNFDQHLFVDPCDAGRG
WGVFGRAAISDEEINPLSWFLSFGLGGHNPMRGHEADTWGAGWFVAGSSGEIGPIIETFL
GPIGDGHGVELFYNWQATPWLNVTPDLQVLAPSRENVDTALVLGVRAVMLL
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgcgtatttcccacatcgcccgctccctggcgctcgccgccgccagcgtgggatcgggc
caagccctcgcccaagagcctctgaccggcgattggtacgggaaccgtacgtacctggcg
gacaacggcgtcactttccagttcgacgtggcccagttctatcagggcgtcaccgccggc
ggtcttaaccaacacttcaaatacggcggccacggcgactacgtcaccaacgtcgatttc
ggcaagcttggcgtccaagagggcctgttcctcaaggtccgcgccgaacaccgctttggc
gaaaacatcaacggcgacacgggcgccttcctaccggcgtcggtgctcacagccttgccg
gtcgccgacagcgaagagctctatctgaccaacgtcttgttcacccaggcgttgtcggag
cggttcgctgttttcgcgggcaagctcgacacgctcgatggcgacctcaacgcgttcgcc
cacggccgcggcaagacgcagttctcgaacgtcggattcgtcaccaacccggcgctgctg
cgggtggttccgtactcgacactcgggtgcggcttcgctgtgctgggcgatgagggcgag
cccgtcttcagctatatgctgctcaactcggaagacaccgcgaagacctccggtttcagc
gagttgttcaacgacggagtcgcgatggcggccgaactccggctgcccaccgagttctat
ggcctgcccgggcaccagctggtcggcgccgcttggaacaaccgtgagttcacgtcgctc
ggccaagacccgcgcgtggtgctgccggacattcccgtggctcaggccagcgacgcctgg
gccgtgtactggaacttcgaccaacacctcttcgtcgatccctgtgacgccggccgtggt
tggggcgtcttcgggcgggcggcgatctcggacgaggagatcaatccgctgtcgtggttc
ctcagcttcggcctcgggggacacaacccgatgcgcggccacgaggccgacacctggggc
gccggctggttcgtcgcggggtcgagcggcgagatcgggccgatcattgagacgttcctc
ggtccgatcggcgacggccacggcgtcgaactcttctacaactggcaggcgaccccctgg
ctcaacgtgacgcccgacctccaggtcctcgccccgtcgcgggagaacgtcgatacggcc
ctggtgctaggcgttcgggcggtaatgctgctttag
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