Bacillus methanolicus: BMMGA3_06495
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Entry
BMMGA3_06495 CDS
T03209
Symbol
rny
Name
(GenBank) Ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
bmet
Bacillus methanolicus
Pathway
bmet03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bmet00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BMMGA3_06495 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bmet03019
]
BMMGA3_06495 (rny)
Messenger RNA biogenesis [BR:
bmet03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BMMGA3_06495 (rny)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KhpA-B_KH
Propep_M14
KH_2
Motif
Other DBs
NCBI-ProteinID:
AIE59727
UniProt:
I3DZI7
LinkDB
All DBs
Position
1277139..1278698
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AA seq
519 aa
AA seq
DB search
MEPITIISILLGLFVGAVVGYLIRKSIAEAKISGAKNAAEQILEDARRQADALKKEALLE
AKDEIHKLRTEAEREVKERRIELQKQENRLLQKEENLDRKDETLDKREALLEKKEDSLNK
RQQHIEEMESKVDEMVRAQQAELERISSLTREEAKSIILERVEKELSHEIALMIKESEIR
VKEEADKKAKEILSLAIQRCAADHVAETTVSVVNLPNDEMKGRIIGREGRNIRTLETLTG
IDLIIDDTPEAVILSGFDPIRRETARLALDKLVQDGRIHPARIEEMVDKARREVDEHIRE
IGEQTTFDVGVHGLHPDLIKILGRLKYRTSYGQNVLKHSMEVAQLSGLLAAELGEDETLA
RRAGLLHDIGKAIDHEVEGSHVEIGVELATKYKEHPVVINSIASHHGDTEPTSIIAVLVA
AADALSAARPGARSETLENYIRRLEKLEEISESYEGVEKSFAIQAGREVRIMVKPEQIDD
LEAHRLARDIRKRIEEELDYPGHIKVTVIRETRAVEYAK
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atggaacccattacgatcatctccattttgcttggcctattcgtcggtgcagttgttggc
tatttaattcgtaaatccattgcggaagcaaagatctcaggtgcaaaaaatgctgctgaa
cagatcctggaggatgccaggcgtcaagcagatgcattaaagaaagaagctttgcttgag
gcaaaggatgaaattcacaagcttcgtactgaagctgagcgtgaggtaaaagaacgaaga
attgaactgcaaaaacaagaaaaccgtttactgcaaaaagaagagaatcttgatcggaag
gacgaaacgttagataaacgtgaagcccttttagaaaagaaagaggattcccttaacaaa
agacaacagcatattgaagagatggaaagcaaagtggacgagatggtacgagcacagcaa
gctgaacttgaacgtatctcgagcttgacacgggaagaggcaaaatctatcattttggaa
cgcgttgagaaagaattgtctcacgaaattgcgttgatgataaaagaaagtgaaattcga
gtaaaagaagaggcagacaagaaagcgaaagaaatcttgtcactggctatacaaagatgt
gcagctgatcatgtagccgagacaactgtatcagttgtgaaccttccaaatgatgaaatg
aaaggccggataatcggccgtgaaggaagaaatattagaactcttgaaacgctgaccggt
attgaccttatcatcgacgatactcctgaagccgtaattttatcaggttttgaccctata
cgccgtgaaacagctcgtttagcattagacaagcttgtacaagacggacgcattcaccct
gcacgaatcgaggaaatggtagataaagcccgccgtgaggtggatgaacatatccgtgaa
attggtgaacaaactacatttgatgtcggtgttcacgggctccatccagatttaattaaa
attcttggccgattgaaatatcgtacaagttacggccaaaatgttttaaaacactcaatg
gaagttgcacagctttcaggtctgctggcagctgaacttggtgaagacgaaactttagca
cgccgtgcaggactgcttcatgatatcggaaaagcaattgaccatgaagttgaaggaagc
catgttgaaatcggtgtggaacttgcaacgaagtacaaggaacatccggttgtgatcaac
agcattgcttcacaccatggtgacactgaacctacgtcaatcattgctgttttagtggca
gcagctgacgcattatcagcagcgagacctggagcacgcagtgaaacacttgaaaactat
attcgacgcctagaaaagcttgaagagatttctgagtcatacgaaggtgtggagaaatca
tttgcaattcaagcaggccgcgaggttcggattatggttaagccggaacaaattgatgat
cttgaagctcatcgattggcaagagacattcgcaagagaattgaagaagaacttgattat
ccaggacatataaaagttacggtgattcgtgagacaagggctgttgaatacgcaaaataa
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