Bacillus methanolicus: BMMGA3_16105
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Entry
BMMGA3_16105 CDS
T03209
Symbol
rho
Name
(GenBank) Transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
bmet
Bacillus methanolicus
Pathway
bmet03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bmet00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BMMGA3_16105 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bmet03021
]
BMMGA3_16105 (rho)
03019 Messenger RNA biogenesis [BR:
bmet03019
]
BMMGA3_16105 (rho)
Transcription machinery [BR:
bmet03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
BMMGA3_16105 (rho)
Messenger RNA biogenesis [BR:
bmet03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BMMGA3_16105 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
AAA_22
ATPase_2
NACHT
AAA
AAA_25
Spore_III_AA
DUF6417
Motif
Other DBs
NCBI-ProteinID:
AIE61574
UniProt:
I3EBM2
LinkDB
All DBs
Position
complement(3209995..3211263)
Genome browser
AA seq
422 aa
AA seq
DB search
MELTISSLENMKLKELYELAREYKVSYYSKLTKKELIFAILKARAEQQGYFFMEGVLEII
QSEGFGFLRPINYSPSSEDIYISASQIRRFDLRNGDKVSGKVRPPKENERYFGLLHVEAV
NGEDPETAKERVHFPALTPLYPNRQMKLETTSENLSTRILDLIAPVGFGQRGLIVAPPKA
GKTMLLKEIANSITTNHPEAELIVLLIDERPEEVTDIERSVAGDVVSSTFDEVPENHIKV
AELVLERAMRLVEHKRDVVILMDSITRLARAYNLVIPPSGRTLSGGIDPAAFHRPKRFFG
AARNIEEGGSLTILATALVDTGSRMDDVIYEEFKGTGNMELHLDRSLAEKRIFPAIDIRR
SGTRKEELLIPKEHLDKLWAIRKSMSDTPDFAEKFLRKLKQTKSNEEFFALLDEEMKAKR
SQ
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atggaattaactatttcaagcttagaaaatatgaaattaaaagaactctacgagcttgct
cgagaatataaagtatcttattacagcaaattaacgaaaaaagaactgatttttgccatt
ttaaaagcaagagccgagcagcaaggctattttttcatggaaggcgttcttgaaatcatc
cagtccgaaggctttggcttcctaaggccgatcaactattcgccgagctccgaagatatt
tatatttctgcatcacaaattcgccgttttgacttgagaaacggggataaagtgtccgga
aaagtgcgtcctccaaaggagaatgaacggtatttcggtcttttgcacgtagaagctgta
aacggtgaggaccctgaaacagcaaaagaacgggttcacttcccagcattaaccccgttg
tatccaaaccgccaaatgaaacttgaaacaacctccgaaaatttatcgacaagaattttg
gatttaattgctcctgttggctttggacaacgcggattgattgttgctcctccaaaagca
ggaaaaacgatgctgttaaaagagatcgctaatagcattacaaccaatcatcccgaagct
gaactaattgtattactcatcgatgaacgcccggaagaagtaaccgatattgaaagatcg
gttgccggtgatgtggtaagctcaacatttgacgaagttccggaaaaccatattaaagtt
gctgagcttgttttggaacgggcgatgcgcctagttgagcataaaagagatgtcgtcatt
ttaatggacagcataacccgtcttgctcgcgcctataaccttgttattcctccaagtgga
cgtacattatccggagggattgaccctgctgcgttccatcgtccaaaacgtttttttgga
gctgcccgtaatattgaagaaggcggaagcttaacaattctagcaacagctcttgttgat
accggttcacgtatggacgatgtcatctacgaagaatttaagggaacaggaaatatggag
ctgcatctagaccgctcactcgcggaaaagcggatttttcctgccatcgatattcgccgt
tccggtacgcgaaaagaagagctgctcattccaaaagagcatcttgataaattatgggca
atcaggaaatcaatgtcagacactcctgactttgccgaaaaatttttgcgcaagttaaag
caaactaagtcaaatgaggagtttttcgctttgcttgacgaagaaatgaaggcgaaacgc
tctcagtag
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