Babesia microti: BMR1_01G01320
Help
Entry
BMR1_01G01320 CDS
T05554
Name
(RefSeq) DEAD/DEAH box helicase
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
bmic
Babesia microti
Pathway
bmic03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bmic00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BMR1_01G01320
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bmic03019
]
BMR1_01G01320
03036 Chromosome and associated proteins [BR:
bmic03036
]
BMR1_01G01320
Enzymes [BR:
bmic01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BMR1_01G01320
Messenger RNA biogenesis [BR:
bmic03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
BMR1_01G01320
mRNA degradation factors
5'-3' decay
Decapping complex
BMR1_01G01320
Chromosome and associated proteins [BR:
bmic03036
]
Eukaryotic type
Gene silencing
piRNA pathway
BMR1_01G01320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
24423343
NCBI-ProteinID:
XP_021337379
LinkDB
All DBs
Position
I:complement(481095..482984)
Genome browser
AA seq
622 aa
AA seq
DB search
MNGHFTSDYMNVINNEAVCDDLVGEDVCNDEVLDKTFAHFNLNSKLLEIIGFLGFTRPSP
IQYKGLPLGLDAKDLIVQSKSGTGKTLLFILIILSKIDDTGLSVIIAPTRELVVQIHQEI
VKFTSLLDNSIKPLYSTSGKSLKKDKKVISQGCKIITSTPGRLLALLKPIEKMGYIKTLV
LDEVDMLMDDQFQDQIAYVISKIVTEYTQLIATSATLLPQFASKLANLLPDRQLISVSTC
LPFVRHSKCEDESPVLRGIKFCFIKLSQHERDKFKSLLHVLESLEFKQAIIFCNRSVDAI
NAFNNLSNLGYYCDYTSSKVSHGGRMRCLKNLRNNSCKIVICSDLLSRGIDSLLVDLVVN
LDVPFNKQTFLHRSGRAARFGKSGICVCIASYDEWQSLDYYRMSLKLSLYPISELATKRS
NGSFKCSRLGLPVNAFHTLNDTCTTRADQFSLNELNCFNGIVELSGAPFVTVYNMEGQIV
LNFVAKDVNWVIDDVYKLIFGLDPIKQAINSEIINKVFISGPLTSSMLLVKLLLDERIPN
NNNHSENTQLYNRLFANKQTKNIGYSELPNIITDATDNDGCNVRDSALGYYGTTPLNKNG
TIHELYYKFMSLHFTKQLSCVI
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgaatggacactttaccagcgattacatgaatgtaattaacaatgaagccgtttgtgat
gatttagtaggtgaagacgtatgtaatgacgaagttttagataaaacatttgcccatttt
aacttaaattccaaattattggagataatagggtttctgggttttactagaccatcgcca
atccaatacaagggtctacccctaggccttgatgctaaggacttgattgtgcagtcgaaa
agtggtactggtaaaacactcttgtttatattgatcattttatctaaaatagacgatact
ggactatcggtgataatcgctccaaccagggagctcgtggtacaaattcatcaggaaata
gtaaagtttacaagtttgcttgataattccatcaaacctttgtattccacctctggcaaa
tctcttaagaaggataaaaaggttatttcgcaaggatgcaaaataattacctcgacacca
ggccgtttgttggctctactaaaacctattgaaaaaatgggttatattaagacgttagtg
cttgatgaagtggatatgttgatggatgaccaatttcaagatcaaattgcctatgtaatc
tcaaaaatagtcacagaatatacgcaattgattgccacatctgctacacttcttcctcaa
tttgctagtaaattagcgaatcttctgccagataggcaattaataagtgtttcaacatgt
ctgccttttgttagacactcgaaatgtgaggatgaatcgccagtgcttaggggcataaaa
ttttgtttcattaaactatctcagcatgaacgtgataaatttaaaagcttgttacatgtg
ttggagtcactggaatttaagcaagcaataattttctgcaatagatctgtcgatgcaatt
aatgcatttaacaatctaagcaatttgggttactattgcgattatactagctcaaaagtt
agccatggagggaggatgaggtgcctaaaaaatttacgcaataactcatgtaaaattgtc
atatgttctgaccttctttctcgaggaattgattcgttgttggtagatttagtggtcaat
ttagatgtaccctttaacaaacaaacatttttacatagatcaggcagggcagccaggttt
ggaaaaagtggtatttgtgtatgtatcgcaagttatgatgagtggcagtcattggattat
tataggatgtccttgaagttatctttgtatccaatttcagaattggctaccaaacgctca
aatggttcatttaaatgttctcgattgggattgcccgtaaatgcatttcacaccttaaat
gacacttgtaccaccagggctgatcaatttagtctgaatgagttgaattgttttaacgga
atcgttgaacttagtggagctccatttgtcacagtttacaatatggagggtcaaattgta
ttaaatttcgttgctaaggatgttaattgggtcattgatgatgtgtataagttgatattt
ggactagatcccataaagcaagcaataaactctgaaattataaataaagtgttcatttca
ggacctttaacatcgtcaatgctactagtgaagttgctactggatgagagaatccccaat
aataataaccacagtgaaaatactcaattatacaacagattgtttgctaataaacaaaca
aagaatattggttacagtgaactacctaatataataactgacgcaactgataacgatggg
tgtaatgtgcgcgattctgcattgggttattacgggaccactccactcaataaaaatggt
acaattcatgaattgtactataaatttatgagtctccacttcaccaagcaattatcgtgc
gtaatctaa
DBGET
integrated database retrieval system
