Borrelia miyamotoi CT14D4: RJ61_03995
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Entry
RJ61_03995 CDS
T03577
Name
(GenBank) polynucleotide phosphorylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
bmiy
Borrelia miyamotoi CT14D4
Pathway
bmiy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bmiy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RJ61_03995
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bmiy03019
]
RJ61_03995
03016 Transfer RNA biogenesis [BR:
bmiy03016
]
RJ61_03995
Enzymes [BR:
bmiy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
RJ61_03995
Messenger RNA biogenesis [BR:
bmiy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
RJ61_03995
Transfer RNA biogenesis [BR:
bmiy03016
]
Prokaryotic type
tRNA degradation factors
RJ61_03995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
KH_1
S1
KhpA-B_KH
Motif
Other DBs
NCBI-ProteinID:
AJA58988
LinkDB
All DBs
Position
851652..853805
Genome browser
AA seq
717 aa
AA seq
DB search
MKKVLKLKIGREDLILETGLLAKQANGAVLATYGGSTVLATVCCSNSIREDLDFIPLSVE
YNEKYYAAGKIPGGFIKREGKPKDKEVLVSRLIDRPMRPLFDKRFGREIQVVPTTLSTDQ
MNPPDIVGMNAAFASVFLSDIPFDGPIAAVRIAYFNNEFIVNPSFSEIENSMLDIVVAGS
LDGITMVEGGANEVSEEVLISAIDQAYEYIKQICNLQKEFISIIDKREKLPLAYEERVFE
FKDELKSLIYSELKDACFVRGKLNRDKAIKLVQKKAYEHFSSINQVNEESELLFYKAFDD
FEREIVRKSILEDNLRTDGRTPTQIRNIVAEVDLLKRTHGSALFTRGETQTLAVTTLGTS
IDEQIMDDIDGDKRLNFMLHYNFPPFSVGETGRLMTGRREIGHGHLAQRSLEAMLPKKDD
FPYTIRVVSEVLESNGSSSMATVCSGSMSLMAAGVPVKEQVAGIAMGLVNEGDKYVVLSD
ILGEEDHLGDMDFKVAGTKNGITGFQMDIKISNVTRQLMKEALEQARIGRMHILSIMDSV
ISKSRDDISVNAPKIIQLQIDIDKISLVIGSTGKTVKAITDEFEVRVQIEQDGRINLFGT
DSLKMQKAKERIESIVREPKIGEIYEGIVKKINSFGAFIELTPIKEGFLSNRAKLRDDRY
GDIRNSKYGNSRHSRYGRDNRTTFSMRPPRLEEGQMIKVRISDIDKFGKIELEFVRD
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaaaagttttaaagttgaaaataggaagagaagatttaattttggaaacaggctta
ttggctaagcaagcaaatggtgcagttcttgctacttatggtggttctactgttcttgct
acggtctgttgctcaaattcaattcgtgaagatttagattttattcctttgtctgttgaa
tataatgaaaagtattatgctgctggaaaaattcctgggggatttattaagagagaaggt
aaaccgaaagataaagaagtacttgtttctagattaatagatagaccgatgagacccctt
tttgataagaggtttggtagagaaattcaggttgttcctacaactttgtctacagatcag
atgaatcctcctgatattgttgggatgaatgctgcatttgcatcggtttttttatcggat
attccgtttgatggtccaattgctgctgttagaatagcctatttcaataatgaatttata
gtaaatccttcttttagtgagatagaaaattctatgcttgatattgttgttgcagggagt
ttggatgggattacaatggttgaaggtggtgctaatgaagttagcgaggaagttttaatt
tctgctatagatcaagcttatgaatatattaaacaaatttgtaatctccaaaaggaattt
atatctataatcgataagagggaaaaattgccacttgcttatgaggaaagagtatttgag
tttaaggatgaacttaaaagtttaatttattctgaacttaaggatgcttgctttgtgagg
ggcaagcttaatagagataaggctataaaattagtccaaaagaaagcctatgaacatttt
tcttctatcaatcaagtaaatgaagagagtgaattgcttttctataaagcttttgatgat
tttgagcgagaaattgttagaaaatcaattcttgaagataatcttagaactgatggacgt
actcctacacagataagaaatattgttgctgaagttgatctgttaaagagaacacatggt
tctgctctttttacaagaggtgaaactcagacattggctgtaacaactttgggcacaagt
attgatgaacagataatggatgatattgatggtgataagcgtcttaattttatgcttcat
tataattttcctcctttctctgttggagagacaggtagactaatgactggcaggcgtgag
attggacatgggcacttagctcaaaggtctttggaagccatgttacctaaaaaagatgat
tttccatatactattagggtagtatctgaagtattagaatcaaatggttcatcatcaatg
gctacagtatgttctggtagtatgtctttaatggcagctggagttcctgttaaggagcaa
gttgcaggaatagctatgggtcttgttaatgagggcgataagtatgttgttttaagtgat
attcttggagaagaggatcacttaggggatatggattttaaggttgcaggcactaagaat
ggaatcactggttttcagatggacattaagatttcaaacgttacaagacagttaatgaag
gaagctcttgaacaggcacgaattgggagaatgcatattctatctattatggattctgtt
atttcaaaatcaagagacgatatatctgttaatgctcctaagattattcaattacaaatt
gatattgataaaatttctcttgttattgggtctactggtaaaacagttaaagcaattaca
gatgaatttgaagttagagttcaaattgagcaagatggaaggattaatctttttggaact
gatagcttaaagatgcaaaaagctaaggaaagaatagagagtattgtcagagaacccaag
atcggtgaaatttatgaaggaattgttaaaaagattaacagttttggagctttcattgag
cttactcctataaaggaaggatttttgagtaaccgagcaaaattaagagatgatagatat
ggtgatattaggaattctaagtatggtaatagtagacattctagatatggtagagataat
aggactacatttagtatgcgtcccccaagattagaggaaggccaaatgattaaggtcaga
atatctgatatcgataagtttggtaagattgagcttgaatttgttagagattag
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