Bacillus mojavensis: HC660_14080
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Entry
HC660_14080 CDS
T07122
Symbol
yoqV
Name
(GenBank) ATP-dependent phage DNA ligase
KO
K01971
bifunctional non-homologous end joining protein LigD [EC:
6.5.1.1
]
Organism
bmoj
Bacillus mojavensis
Pathway
bmoj03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
bmoj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
HC660_14080 (yoqV)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bmoj03400
]
HC660_14080 (yoqV)
Enzymes [BR:
bmoj01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
HC660_14080 (yoqV)
DNA repair and recombination proteins [BR:
bmoj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
HC660_14080 (yoqV)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigD_Prim-Pol
DNA_ligase_A_M
RNA_ligase
Motif
Other DBs
NCBI-ProteinID:
QJC95884
UniProt:
A0A6H2JPV6
LinkDB
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Position
complement(1414948..1416783)
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AA seq
611 aa
AA seq
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MAFTMQPVLTSSPPKGAEWRYEVKYDGFRCILRINPSGVTLTSRNGLELNSTFPEISLFA
ETAFQHIKKELPLTLDGEIVFLANPFRSDFEHIQVRGRLKRPDKIQESASSRPCCFLAFD
LLERSGQDVSTHSYIDRKTSLHELMSAAKLPAEPNPYAKETIQYIPSHQHFDPIWEKIIK
YDGEGIVAKKINSKWIEKKRSSDWLKYKNFKHADVCITGFNPHNGFLTVSVLKNGVMTPV
ASVSHGMSEEEKNAIRAIMEEHGQKTSSGEYTLEPSICATVQYLTILQGTLREVSFVKFQ
FHMDWTDCTFAQLVRRSKPVHPKLQFTSLDKIIFEKHKKTKEDFIQYMIEISDYLFPFLK
DRAVTVIRYPHGSRGESFFQKNKPDYTPDFVQSFFDGSHEHVVCKDLSTLLWLANQLALE
LHVPFQTIASRRPAEIVIDLDPPSRDDFLMAVQAANELKQLFESFGITSYPKLSGNKGIQ
LYIPLSPEAFTYEDTRQFTQLIAEYCTNAFPELFTTERLIKNRHGKLYLDYLQHAEGKTI
ICPYSTRGNELGTVAAPLYWHEVQPSLTPAMYTIDTVVDRVKKHGCPFYEFYRNPQDEPL
AAILNQLKKKS
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atggcgtttaccatgcagcccgtccttacttcttcacctccaaaaggagcggaatggcgt
tacgaagtaaaatatgacgggtttcgctgtattctccgcattaatccgtcaggtgtgaca
ttaacgagcagaaatggtttagagcttaacagtaccttccctgaaatttctctattcgcc
gaaactgcttttcagcatataaaaaaggaacttccgttaacacttgatggagaaatcgtt
tttttggcgaatccattccgttcagattttgaacatattcaagtgcggggacgcttgaaa
aggccggataagatacaggaatccgcaagctctcggccttgctgctttctcgcatttgac
cttttggaacgaagcggacaagatgtatccactcattcctatattgaccgaaaaacatcg
ctgcatgagctgatgtctgctgcaaagctcccggctgagccaaatccttacgcaaaggaa
accattcagtatatcccctcccaccagcacttcgatccaatttgggagaagataataaag
tatgacggagagggcattgtagcgaaaaaaatcaacagcaaatggatcgaaaaaaaacgg
tcatctgattggctgaaatacaaaaactttaaacatgccgatgtttgtatcacaggattt
aatcctcacaatggatttctgacggtttctgtgttaaaaaacggtgtaatgacgcctgtc
gcctctgtatcacacggaatgagcgaggaagaaaaaaatgccatacgcgcaattatggaa
gagcacggacaaaaaacatcgtcaggtgaatacacactcgaaccatcgatctgcgctact
gttcagtatttaacgattttacaaggcacgctaagagaggtttcgtttgtcaaatttcaa
tttcatatggactggaccgactgcacctttgcacagctcgtgcgccgctcaaagccggtt
catccaaaactgcagtttacaagcctagataaaatcatatttgaaaagcataaaaaaaca
aaagaagatttcatccagtatatgattgaaatcagcgactatctgttcccgtttctcaaa
gatcgtgctgtcacggttattcgctatccgcacggatcaaggggcgaatcctttttccaa
aaaaataagcctgattatacgccggactttgtccaatccttttttgacgggagccatgaa
catgtggtctgtaaggacctgtctaccttattgtggcttgccaatcagctcgctttggag
ttacatgttccttttcaaacgattgcaagcaggaggccggcagagattgtcattgattta
gatcccccgtcccgggatgactttctaatggctgttcaggcagcaaatgaacttaaacag
ctcttcgaatccttcggcatcacatcgtatcctaagctttccggcaacaaggggattcag
ctttacattcccttgtcaccagaagcatttacgtacgaggacacacgccaatttacacag
ctgattgccgaatattgtaccaatgcatttccggagctatttacaaccgaacgcttgatc
aaaaacaggcatggaaaattgtatctcgattatttgcagcatgctgaaggaaaaacgatt
atctgtccctattccaccaggggaaacgagcttggcaccgtagcggcgccgctctattgg
cacgaggtacagccatctttgacaccggcgatgtatacaatcgataccgtcgttgaccgg
gtcaagaaacacggatgcccgttttatgaattttaccgcaatccgcaggatgaacctctt
gccgctattttgaatcagctgaagaaaaagagctga
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