Bombyx mori (domestic silkworm): 101742077
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Entry
101742077 CDS
T02817
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46 isoform X1
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
bmor
Bombyx mori (domestic silkworm)
Pathway
bmor03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bmor00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101742077
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bmor03041
]
101742077
Enzymes [BR:
bmor01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
101742077
Spliceosome [BR:
bmor03041
]
Complex A
U2 snRNP components
U2 related factors
101742077
Complex B
101742077
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CdAMP_rec
Motif
Other DBs
NCBI-GeneID:
101742077
NCBI-ProteinID:
XP_004931727
UniProt:
A0A8R1WK79
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Position
3:9972916..9989400
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AA seq
1018 aa
AA seq
DB search
MVRSGRDRDRERDRRRSRSRSDTPDRKRRRSRSRSRDRGSKSSKRKRSRSRDRDSKRDRS
RERDRSRERDRSRERDRDRKSDKRDDKRNGSSKSSRKKSPEKERERSKSKEKSSKADSSE
YNPGSVDKEEEQNRLEAEMQKRRERIERWRAERKRKEIESAKKEVQKGSIVTNIQIPTSK
KWSLEDDSGDEALPGEDAEGKEKNNIGEKKEEEDEIDPLDAYMQEVQQEVRKVNQMDQAK
GIISVPTTGGTGIVILTGTAKKKVTEQKNKGELIEQNQDGLEYSSEEETEDIKDAAANLA
SKQRKDLIKVDHASLDYMQFRKSFYTEVNELARMTPEEVETYRTELEGIRVKGKGCPKPI
RTWAHCGISKKELDILKKLNFEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTLAFILPMF
RHVLDQPALEDTDGPIALIMTPTRELCMQIGKDIKKFAKSLGLRVVCVYGGTGISEQIAE
LKRGAEMIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMKIIDNIR
PDRQTVMFSATFPRQMEALARRILQKPIEIQVGGRSVVCKDVEQHVAILEEEAKFFKLLE
LLGLYSQMGSIIVFVDKQENADSLLKDLMKASYSCMSLHGGIDQFDRDSTIVDFKNGKVK
LLVATSVAARGLDVKQLVLVVNYDCPNHYEDYVHRCGRTGRAGNKGFAWTFLTPEQGRYA
GDVLRAFELAGVSPPAELKNLWEKYKEAQEKDGKKVHTGGGFSGKGFKFDESEAQAASEK
KKYQKAALGLQDSDDEDVEGDLDQQIETMLAAKKIVKEIKPGVAVSGPAAAAASATDGKL
ELARRLASRINLAKGLGADQKGATQQAAEAILKGAPSQTLITAKTVAEQLAAKLNTRLNY
QPRDDNTNEPTEEVFRKYETELEINDFPQQARWRVTSKEALALISEYSEAGITVRGTYVQ
PGKAPPEGERKLYLAIESSQELAVAKAKSEITRLIKEELLKLQTSAHHMVNKARYKVL
NT seq
3057 nt
NT seq
+upstream
nt +downstream
nt
atggttaggagtgggagagaccgtgatagggaaagggatcgacgtagatctcgaagtcgt
tctgacacaccggatcgtaaacgaaggaggtcaagatcaagaagtcgtgatcggggctcg
aaatcttcaaagaggaagcgcagtcgtagcagagatcgtgactctaaacgagaccgaagc
cgagaacgggatcgcagtagggaaagagatcgtagtcgtgagcgagatcgggacagaaaa
agtgataaaagagatgataaaagaaatggatctagtaaatcatcgagaaagaagtcaccg
gagaaggaaagggagagatcaaaatcaaaggaaaagagtagcaaagctgattcttctgaa
tataacccgggctctgttgacaaggaagaagagcaaaaccgcttggaagctgaaatgcaa
aaacgtcgtgaacgcatagagagatggagggctgaacgtaaacgtaaagaaatcgaatcc
gctaaaaaagaagttcaaaaaggaagcattgttactaatatacaaataccgacatcaaag
aaatggtcacttgaagatgactctggtgatgaagctttgccaggtgaagatgcggaagga
aaagaaaaaaacaatataggagaaaagaaagaagaagaagatgaaattgatcctttggat
gcgtacatgcaagaagtgcaacaagaagtgcgtaaagtcaatcaaatggaccaagccaaa
ggaattattagtgttccaacaacaggtggcactggcattgtaattcttactggcactgcc
aaaaaaaaggtcactgagcagaaaaataagggtgaactgatagaacaaaatcaagatggc
ttggagtattcgtctgaagaagaaacggaagacataaaagatgccgctgcaaatcttgct
tccaaacagaggaaagacttgatcaaagtagaccatgctagtttagactacatgcaattt
aggaagtcattttacacagaagtgaatgaactagcaagaatgacaccagaggaagtagaa
acgtacaggactgagttggaaggtattcgtgtcaagggaaaaggctgtccgaaaccgatc
aggacatgggcgcattgcggtatcagtaaaaaagaacttgacattctaaagaagttgaat
tttgaaaagcccaccccgatacaagcacaagcgattcctgctattatgtctggaagagat
ctaataggaattgcgaagactggttcaggcaaaacattagcgttcatcctgccaatgttc
cggcacgtgttggaccaaccggcgttagaagatacagacggaccaatagccctcataatg
actcctacaagggaactctgcatgcagatcggcaaagatataaagaagtttgcaaagtca
ctcggattacgtgtggtttgcgtttatgggggcaccgggatatcggaacagatagctgaa
ctgaagcgtggtgccgaaatgatagtgtgcaccccgggacgcatgatcgacatgttggcc
gccaactctgggcgcgtcaccaacctgcgccgcgtcacgtacgtcgtgctcgacgaggcc
gacagaatgtttgacatgggattcgaaccacaggtaatgaaaatcatagacaacataaga
cccgacaggcagaccgtgatgttcagcgcaactttcccgagacagatggaggctctcgct
cgtcggatattacagaagccaatcgaaatacaggttggtggaagaagtgtggtctgcaag
gatgtggaacagcacgtcgctatactagaggaagaagctaaattcttcaaactgctggaa
ctcctcggactctacagtcaaatgggaagcatcattgtctttgtggacaaacaggagaac
gccgacagtctgttaaaagacctcatgaaggcctcgtattcttgcatgagcttacacgga
gggattgatcaattcgacagggactcgacgatagtcgacttcaagaacggcaaggtcaag
ttgctggtagcgaccagcgttgctgcccgagggctggacgtcaagcaactagttctggtg
gtcaactacgactgcccgaatcactatgaagattatgtgcatagatgtggacgcaccggg
cgcgccggcaacaaagggtttgcctggaccttcctcactccggagcagggtcggtacgcg
ggcgacgtgctcagggccttcgagctggccggagtcagtcctcccgccgaactaaagaac
ctgtgggagaagtacaaggaggcgcaggagaaggacgggaagaaggtgcacacgggaggc
ggatttagtgggaaaggtttcaagtttgacgaatctgaagcccaggctgcttcggaaaag
aaaaagtaccagaaggcggctctcggcctccaggactccgacgacgaggacgtggaggga
gatctcgatcaacaaatcgagacgatgctcgctgccaagaagattgtcaaggaaattaaa
ccgggcgtggccgtgtccggtcccgccgcggctgctgctagcgcgacggacggaaagctg
gagttagcgcggcggctcgcgtcccgcatcaacctcgccaagggactcggcgcagaccag
aagggcgccacgcaacaagccgccgaggcgatcctcaagggcgcgccttcgcagacactc
atcacggctaaaacagtggcggaacagctggccgcgaagttgaacacgcgactcaactac
cagccgcgagacgacaacacaaacgaaccgaccgaggaggtgttccgcaagtacgagacc
gagctggagatcaatgacttcccgcagcaggccaggtggagggtcactagcaaggaggcg
ctagctctaatcagcgagtactcagaggccggtataacggtccgcggcacgtacgtccag
ccgggcaaggcgccgcccgagggcgaacgcaagctgtacctcgccatagagagctcgcag
gagctggccgttgccaaagccaaatccgagataacgcggctcatcaaggaagagctcctc
aaactccagacctcggcccatcacatggtcaacaaagctagatataaagttttgtag
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