Bombyx mori (domestic silkworm): 101743440
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Entry
101743440 CDS
T02817
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1 isoform X1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
bmor
Bombyx mori (domestic silkworm)
Pathway
bmor03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bmor00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
101743440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bmor03019
]
101743440
Messenger RNA biogenesis [BR:
bmor03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
101743440
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
101743440
NCBI-ProteinID:
XP_004923005
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Position
15:complement(13316921..13324572)
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AA seq
446 aa
AA seq
DB search
MAETAIETTPGDENDDNWLYGDSGGDANQESTEETQEVQKSADVVGGADEENQDEEEGNN
DSELNDEHFAEVTREDQNGDADSQENGDSDSDDSDDVKVTIGEIKSGSQYASLNIKRGVG
LVASAGGPEKPRSVTTTSGKVTLEDLEGPGSINGVPALEFNIDTIEDKPWNKPGADISDY
FNYGFNEVTWSAYCERQRRMRINETGVGMHMGSVPRPPMPDMRRPPNIRHDDGIPPPMTN
NYQSRENTIQVMTAERREYGRGHPREMPPPEFFSGPPTDYYQPPHATYDEPWGNPFTGHG
QAPGGWTPSDIKELTPAPGALTPAAPPTLPPAAAPLSMHPPYAPPYRQAHPADTRERHRR
DDEDRDRDRDRDRDRERSRSTKPERLREKSYRRDRSRSRSRRHKSRSRSPRMRERSRDRD
RSRDRDRDRSRDRERSIKPKIKDKDD
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaacggccattgagaccacaccgggcgatgaaaacgatgataattggttatac
ggggattctggcggagatgctaaccaagaatccactgaggaaactcaagaagtacaaaaa
tcggccgacgtcgtcggtggtgctgacgaagaaaatcaagatgaagaggaaggtaataac
gattcggaattaaatgatgagcattttgctgaggtaacgcgcgaggatcaaaatggtgac
gctgatagccaagagaacggtgactctgactcggacgacagcgatgacgtcaaagtcacc
attggagagatcaagtctgggtcacaatatgccagcctaaacataaaaaggggagttggc
ttggtagcttctgcagggggacctgagaaacctcgttcagtaactacaacaagtggaaaa
gtgacattagaggacttggaggggccaggaagtattaatggagttcccgctttggaattc
aatattgatactatagaagataaaccttggaataagccgggtgctgatatatcagattat
ttcaattatggtttcaatgaagtaacatggagtgcttattgtgagcggcagcgacgaatg
cgaatcaacgaaacaggtgtgggaatgcatatgggatcggttccccgtccaccaatgcca
gacatgaggcgccccccaaacattagacacgatgatggaataccacctcccatgacaaat
aactatcagtccagagaaaacactattcaggtgatgacagcggagcgacgtgagtacggg
cgcggccacccccgcgagatgccgccgccggagttcttctctgggccgcccactgactac
taccagcccccgcacgctacatatgacgagccatggggtaacccgttcacaggacacgga
caggcaccgggcggctggaccccctccgacatcaaggagctgacgccggcgccgggcgcg
ctgacccccgccgcgccccccaccctgccccccgccgccgcgcccctctccatgcacccc
ccctacgcgccgccctaccgacaagcgcaccccgccgacaccagggagcgacaccgccga
gatgatgaggatcgagaccgcgaccgcgacagggaccgcgaccgcgaacgctcccgctcc
actaaaccggagagactgagggaaaaatcatacagacgggaccgatcgcgttcgagatct
cgccgtcacaagtcccgatctcggtcaccgcggatgcgagaaagatctcgagaccgtgac
cgatccagggacagggaccgagatcgatctcgagaccgggagcgcagcatcaagccgaaa
atcaaggataaagacgattga
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