Bombyx mori (domestic silkworm): 101744339
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Entry
101744339 CDS
T02817
Name
(RefSeq) general transcription factor IIH subunit 2
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
bmor
Bombyx mori (domestic silkworm)
Pathway
bmor03022
Basal transcription factors
bmor03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bmor00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
101744339
09124 Replication and repair
03420 Nucleotide excision repair
101744339
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bmor03021
]
101744339
03400 DNA repair and recombination proteins [BR:
bmor03400
]
101744339
Transcription machinery [BR:
bmor03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
101744339
DNA repair and recombination proteins [BR:
bmor03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
101744339
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ssl1
VWA_2
C1_4
VWA
Phage_Coat_B
HscB_4_cys
Motif
Other DBs
NCBI-GeneID:
101744339
NCBI-ProteinID:
XP_004932094
UniProt:
A0A8R1WKF4
LinkDB
All DBs
Position
8:complement(6996057..7002359)
Genome browser
AA seq
405 aa
AA seq
DB search
MADEDDPKEYRWETGYEKTWEAIKEDEDGLVESLVAEFAQKAARKAAAPRKGPVRLGMMR
HLLLAIDCSEAMSSQDLKPSRFLCTLKLLEKFVEEFFDQNPLSQLGLIAMKNKRAEKITD
LSGNVRKHIKAIQGLSNTPLTGEPSLQNTLELAGRILRPLPGHASRELLVLFASLTTCDP
SDINTTIETLKTDGIRCSVIGLAAEVRICKKMCQDTNGDYGVVLDDCHYQSLLLEYTSPP
PRARSLDAGLVKMGFPHSTPLEEQADPGANVDPPITVCMCHLEEGEGIGGEGHLCPQCRS
KYCSLPAQCRTCGLTLASAPHLARSYHHLFPVEPYEELDNDGQAQYCFGCLRTFTDIDKK
IHRCPRCKEYYCWECEGAVTATLHVCPGCATRPHLYQRLPSTTSS
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgaagatgaccctaaagagtatcgatgggaaactggttatgaaaaaacttgg
gaggctattaaagaagatgaagatgggttggttgaaagcctggtggctgaatttgcccag
aaagcagcacgtaaagcagctgctcctcgtaaaggtccagtcagacttggcatgatgagg
catttacttttagccatagattgttctgaggctatgagctcccaagatttgaaaccttca
cggtttctgtgcacattgaagttgctcgagaaatttgttgaagagttttttgaccagaat
cctctcagtcagcttggtttaatagcaatgaagaataagagagctgagaaaataactgac
ctatctggaaatgtccggaaacacattaaagccatacaaggtttatccaacactccgctg
actggagagccatcattacaaaatacgctagagctggctgggcgaatcctaaggcctctg
cctggacacgcgtcaagagaattactagtgcttttcgcatcccttacaacttgcgatcca
agtgatataaacactaccatagaaacactaaaaacagatggaattagatgttctgttatt
ggtctagctgctgaagtgcggatttgcaaaaaaatgtgtcaagacactaatggagattat
ggtgtggtattagacgattgtcactaccagtcactgctactagagtacacgtcgccgccg
ccccgcgcccgctcgttggacgcgggcctggtgaagatgggcttcccgcattcaacgccg
ctcgaggaacaagccgacccaggggctaatgtcgatccacctattactgtttgtatgtgt
catttggaggaaggcgaaggtataggcggcgagggtcacctgtgtccgcagtgccgctcc
aagtattgttcgttgccagctcagtgtcgcacctgcggcctgacactcgcatcagcacca
catcttgcaagatcataccatcacctgtttccagtggaaccttatgaagaattagataat
gatggccaggcgcagtattgttttggatgcttaagaaccttcaccgatatagacaagaag
atacatcgttgtccccgatgtaaagagtactactgctgggagtgcgagggcgcggtgacg
gccacgctgcacgtgtgtcctggctgcgccaccagacctcatttgtaccagcggctacca
agcacgacctcatcgtaa
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