KEGG   Bombyx mori (domestic silkworm): 101744526
Entry
101744526         CDS       T02817                                 
Name
(RefSeq) histone deacetylase HDAC1
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
bmor  Bombyx mori (domestic silkworm)
Pathway
bmor03082  ATP-dependent chromatin remodeling
bmor03083  Polycomb repressive complex
bmor04213  Longevity regulating pathway - multiple species
bmor04330  Notch signaling pathway
bmor04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:bmor00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    101744526
   03083 Polycomb repressive complex
    101744526
 09130 Environmental Information Processing
  09132 Signal transduction
   04330 Notch signaling pathway
    101744526
   04350 TGF-beta signaling pathway
    101744526
 09150 Organismal Systems
  09149 Aging
   04213 Longevity regulating pathway - multiple species
    101744526
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:bmor03036]
    101744526
Enzymes [BR:bmor01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     101744526
Chromosome and associated proteins [BR:bmor03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     101744526
   HDAC complexes
    Sin3A-HDAC complex
     101744526
    BRAF-HDAC complex
     101744526
    REST complex
     101744526
    SHIP complex
     101744526
    MiDAC complex
     101744526
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     101744526
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    101744526
  Chromatin remodeling factors
   NuRD complex
    101744526
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 101744526
NCBI-ProteinID: XP_004931440
LinkDB
Position
11:complement(13221651..13233323)
AA seq 483 aa
MSMQPHSKKRVCYYYDSDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKAT
ADEMTKFHSDDYIRFLRSIRPDNVSEYNKQMQRFNVGEDCPVFDGLYEFCQLSAGGSVAA
AVKLNKQASEICINWGGGLHHAKKSEASGFCYVNDIVLGILELLKYHQRVLYIDIDVHHG
DGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNIPLRDGMDDESYESI
FVPIISKVMETFQPSAVVLQCGADSLTGDRLGCFNLTVRGHGRCVELVKRFGLPFLLVGG
GGYTIRNVSRCWTYETSVALGVEIANELPYNDYFEYFGPDFKLHISPSNMSNQNTPEYLE
KIKNRLFENLRMLPHAPGVQVQAIPEDAVNDESDDEDKIDKDERLPQSDKDKRIANDGEL
SDSEDEGDGRRDNRAYRAPQRKRPRLDKEPLQIKDDLKPDDMKDDVKNVSNAEESKKDMP
PNP
NT seq 1452 nt   +upstreamnt  +downstreamnt
atgtctatgcaaccgcacagtaagaaaagagtgtgttactattatgacagcgatattgga
aactactattacggacaagggcatccaatgaaacctcaccgcatacgtatgacccacaat
ttactcctcaactatggactctatcgaaaaatggagatttataggcctcacaaagccaca
gctgatgaaatgacaaaattccattcagatgattacattagattcctgcgttctattcga
cctgacaatgtttctgagtacaacaaacaaatgcagagatttaatgtaggtgaagattgt
cctgtttttgatggcctgtatgaattttgtcagttgtctgctgggggttcagttgcagca
gctgtaaaactgaataagcaggcctcagaaatatgcataaactggggtggtggcctccat
catgcaaagaagtctgaagcgtcaggtttctgttatgttaatgacattgttcttggcata
ttggagttgctgaaataccatcaaagagtactatatattgacatagatgtgcatcatggt
gatggtgttgaagaagctttctacaccacggacagagtaatgaccgtttcctttcataaa
tatggagaatattttcctggaacaggtgatttgcgggacattggtgctggtaaaggcaaa
tactatgctgtaaatataccccttcgtgatggaatggatgatgagtcatatgagtctatc
tttgttcccattatatctaaagttatggagacattccaaccaagtgctgtagtactacag
tgtggtgctgattctctgacaggtgacagattgggttgtttcaacttgactgttcgaggt
catggacgctgtgtagaacttgtcaagaggtttggacttccattcttactagtcggcgga
ggcggatataccatacgtaatgtatctcgctgttggacttacgagacatctgttgcactt
ggtgtggaaatagccaatgaactaccatataatgactactttgagtactttgggcccgat
ttcaaactacacatatcaccaagtaacatgtccaatcaaaacacacccgaatatctggaa
aagataaaaaatagactgttcgagaatctcagaatgctcccacatgcgccaggagtacaa
gtgcaagccatacctgaagatgctgtcaatgatgagtcagatgatgaagataaaatagac
aaagatgagagattaccacagagtgataaggacaagcgcatcgctaacgacggcgagctg
tcggactccgaggacgagggcgacgggcgacgcgacaaccgagcctaccgcgcgccgcag
cgcaagcgtccgcgactcgacaaggaacccttgcagatcaaggacgatcttaaacctgat
gacatgaaggatgacgttaaaaacgttagcaacgcggaagaatcaaagaaggacatgcca
ccgaatccctga

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