Peribacillus muralis: ABE28_001975
Help
Entry
ABE28_001975 CDS
T05340
Symbol
ligA
Name
(GenBank) DNA ligase (NAD(+)) LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
bmur
Peribacillus muralis
Pathway
bmur03030
DNA replication
bmur03410
Base excision repair
bmur03420
Nucleotide excision repair
bmur03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bmur00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ABE28_001975 (ligA)
03410 Base excision repair
ABE28_001975 (ligA)
03420 Nucleotide excision repair
ABE28_001975 (ligA)
03430 Mismatch repair
ABE28_001975 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bmur03032
]
ABE28_001975 (ligA)
03400 DNA repair and recombination proteins [BR:
bmur03400
]
ABE28_001975 (ligA)
Enzymes [BR:
bmur01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
ABE28_001975 (ligA)
DNA replication proteins [BR:
bmur03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
ABE28_001975 (ligA)
DNA repair and recombination proteins [BR:
bmur03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
ABE28_001975 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ABE28_001975 (ligA)
MMR (mismatch excision repair)
DNA ligase
ABE28_001975 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
ABE28_001975 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
DNA_ligase_ZBD
HHH_5
HHH
RNA_pol_A_CTD
PTCB-BRCT
5_3_exonuc
RNA_ligase
HHH_3
HHH_8
Motif
Other DBs
NCBI-ProteinID:
AOH53103
UniProt:
A0A1B3XIQ1
LinkDB
All DBs
Position
413793..415799
Genome browser
AA seq
668 aa
AA seq
DB search
MDINAAKKKVLELQTLLNQYSYEYYVMDQPSVPDAEYDRLLRDLIEYEEKFPELQTQDSP
TQRVGGAILDMFEKVEHTTPMLSLGNAFNESDLRDFDRKVRQAVGDDFSYVCELKIDGLA
VTLQYENGYFVRGATRGDGTIGEDITANLKTIKSIPLKLREPITIEVRGEAFMPKKSFES
LNMVKEERGEEPFANPRNAAAGSLRQLDPKLAAKRNLDIFLYAIADLGETGVLTQSEGMD
LLDRLGFKTNRERKTCSNIEEVLAYIVEWTEQRPNLAYDIDGIVVKVNSLEQQGELGYTA
KSPRWAIAYKFPAEEVITTLRDIELNVGRTGVLTPTAILDPVRVAGTTVQRASLHNEDLI
REKDIRIGDQVVVKKAGDIIPEVVNVLAERRTGDEVEFHMPTECPECSSELVRLDGEVAL
RCINPKCPAQIREGLIHFVSRTAMNIDSLGEKVISLLFKEALIQDVADIYKLTYDQLIAL
ERMGEKSVNKLLQAIEASKTNSLEKLLFGLGIRHVGSKAAKTLAREFGTMEALSKATREE
LTSINEIGDKMADSIVAYFELEEVHALLNELEAAGVNLAYKGARAVPVEEIDSFFAGKTV
VLTGKLHQLTRNEAKEKLEALGANVAGSVSKKTDLVVAGEDAGSKLDKAESLGVLVWDEE
RLIEELKK
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atggacattaatgctgcaaagaagaaagtgctcgaactgcaaacgttattgaaccaatac
agctatgaatattatgtgatggaccaaccatcagtgcctgatgctgaatatgaccgactg
ctccgtgatcttattgagtatgaggaaaaatttcctgagctgcaaacgcaagactctccg
acacaacgggtcggaggagcgattttggatatgtttgaaaaggtggagcatacgacaccg
atgcttagcttgggaaatgctttcaatgaaagtgacctgcgcgatttcgataggaaggtc
cgccaagctgttggtgatgatttttcctatgtgtgtgaactgaaaattgatggacttgcc
gtcacgctgcagtatgagaatggatatttcgtaaggggggcaaccaggggagatggaacg
atcggcgaggatattacggccaatctgaaaacgatcaaatcaattccattgaagctgcgg
gagcccattacaatagaagtgcgcggcgaggcattcatgccaaagaaatcattcgagtct
ctgaatatggttaaagaggaacgtggtgaagaaccgttcgcaaacccgcggaatgcggcg
gctggttcattaaggcagcttgatccaaagcttgctgcgaaaaggaacctcgatattttc
ctttatgcgattgcggatttgggtgaaacgggcgtcctaacccaaagtgagggcatggat
ctattggatcgcctggggttcaagacgaatcgggaaagaaaaacatgctccaatatagag
gaagtgctagcctatatagtagaatggacggagcagcggccaaacttagcttatgatatt
gatggaatcgtcgtaaaagtaaattcccttgaacaacaaggtgaattgggttatactgcc
aaaagtccgcgctgggccattgcatataaattcccagcggaagaagtcattacgacacta
agggatatcgagctgaatgttggccgtaccggtgtcttgacgccaactgccattttggat
ccagttcgggtggcgggcacgactgtccaacgggcatcgctgcataatgaagacttgatt
cgtgaaaaggacatcagaatcggagaccaagtggtagtgaaaaaagctggcgatatcatc
ccagaggtggtcaatgtactggcagagcgccgcactggggatgaggtggagttccatatg
ccgactgaatgcccggaatgcagcagtgagctcgtccgtctcgatggggaggttgcttta
cgctgcatcaatccaaagtgtccagcacagatacgggaagggctgattcactttgtatcc
cggacggcaatgaatatagacagcctaggtgagaaagtgatcagcttgctgtttaaagaa
gcgctgatacaagatgtggctgatatttataagcttacatacgaccaactgattgccttg
gaacggatgggggaaaaatcggtcaataaactccttcaagcgatcgaggcttcaaaaacg
aattcattggaaaaattgcttttcggcttggggattcggcatgttgggtcgaaagcggcc
aaaacattggctcgggaatttggcacgatggaagccttaagtaaagcaacccgtgaagaa
ttaacgtccattaatgaaataggtgataagatggcggactccatcgttgcatattttgaa
ttggaagaagtccatgcgctattgaatgagctggaagctgcaggcgtgaatcttgcttac
aaaggggcaagagctgtacccgttgaggaaatcgattcattttttgccgggaaaacggtt
gtgttaactggtaaattacatcagctaacacgaaatgaagcaaaagaaaaattagaggcg
cttggagctaatgttgctggaagcgtcagcaagaaaaccgatttggtcgtagctggggaa
gatgcaggatcaaaactggataaagccgagagtttaggcgtcctggtttgggatgaagag
agactgattgaggaactaaaaaaataa
DBGET
integrated database retrieval system
