Balaenoptera musculus (blue whale): 118880977
Help
Entry
118880977 CDS
T09887
Symbol
CHD6
Name
(RefSeq) LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding protein 6
KO
K14436
chromodomain-helicase-DNA-binding protein 6 [EC:5.6.2.-]
Organism
bmus
Balaenoptera musculus (blue whale)
Brite
KEGG Orthology (KO) [BR:
bmus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bmus03036
]
118880977 (CHD6)
Chromosome and associated proteins [BR:
bmus03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
118880977 (CHD6)
BRITE hierarchy
Motif
Pfam:
SNF2-rel_dom
Helicase_C
Chromo
ResIII
DEAD
HDA2-3
MUN
Motif
Other DBs
NCBI-GeneID:
118880977
NCBI-ProteinID:
XP_036681119
EnsemblRapid:
ENSBMSG00010020873
LinkDB
All DBs
Position
15:18536158..18741606
Genome browser
AA seq
2720 aa
AA seq
DB search
MIMKIQKKEKQLSNLKVLNHSPMSDASVNFDYKSPSPFDHSTDQEEKTEDVARPCLPQKD
LYAAEEDAETLFPRKTTSHNGMEDSGGGGTGVKKKRKKKDPGEQEGAAKGSKDREPKPKR
KREPREPKEPRKAKEPRKAKEPKEPKQKDGAKKVRKPREASGPKEAKEKRSGPDSAARTK
SKKASKEQGPTPVEKKKKGKRKSETTVESLELDQGLPNPSLRSPEESTESADSQKRRSGR
QVKRRKYNEDLDFKVVDDDGETIAVLGAGRTSALSASTLAWQAEEPPEDDANIIEKILAS
KTVQEVHPGEPPFDLELFYVKYRNFSYLHCKWATMEELEKDPRIAQKIKRFRNKQAQMKH
IFTEPDEDLFNPDYVEVDRILEVAHTKDAETGEEVTHYLVKWCSLPYEESTWELEEDVDP
AKVKEFESLQVLPEVKHVERPASDAWQKLEKSREYKNSNQLREYQLEGMNWLLFNWYNRK
NCILADEMGLGKTIQSITFLSEIFLRGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYH
GSQISRQMIQQYEMVYRDAQGNPLSGVFKFHVVITTFEMILADCPELKKIHWSCVIIDEA
HRLKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPSQFPSEDCFLEEFG
DLKQRSRVEKLQSILKPMMLRRLKDDVXKNLAPKQETIIEVELTNIQKKYYRAILEKNFS
FLTKGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKTHSPDAPDFQLQAMIQ
AAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQA
AIDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSK
AVKVYRLITRNSYEREMFDKASLKLGLDKAVLQDINRKGSTNGVQQLSKMEVEDLLRKGA
YGALMDEEDEGSKFCEEDIDQILQRRTHTITIQSEGKGSTFAKASFVASGNRTDISLDDP
NFWQKWAKIAELDTEAKSEKESLVIDRPRVRKQTKHYNSFEEDELMEFSELDSDSDERPT
RSRRLSDKTRRYLRAECFRVEKNLLIFGWGRWKDILTHGRFKWHLNEKDMEMICRALLVY
CVSXLQGDEKIKSFIWELITPTKDGQAQTLQNHSGLSAPVPRGRKGKKTKNQLLLPELKN
ADWLATCNPEVVLHDDGYKKHLKQHCNKVLLRVRMLYYLKAEILGEAADKAFEGTPAREL
DVPLPDIDYVEIPVDWWDAEADKSLLIGVFKHGYERYNAMRADPALCFLEKVGMPDEKSL
SAEQGVTDGTSDIPERGNTDKEDNTEDKVDGLQKQMESSSDGGDGIFGEKKDDSRAAQDG
SDPDKSPWPVSSALTARLRRLVTIYQRCNRKELCRPEILGPGNQGYWVQEEMFRRSSEMD
LINKEAQKRWTRREQADFYRAVSSFGVVYDQEKKTFDWTQFRIISRLDKKSDESLEHYFY
SFVAMCRHVCRLPAWKDGGPPDPSICVEPITEERAARTLYRIELLRKVREQVLQCPQLHE
RLQLCRPSLSLPVWWECGKHDRDLLIGTAKHGLNRTDYYIMTDPQLSFLDAYRNYAQHKR
TDPQAPGSLCCLYQTNSKLYESLAYTQMSRTSESLENEPENLVKIEGRDDHLGPPRGSLS
DMTCENFISKVQDVISITHDESLLPESLESMMYGKKALNQEPVSFQESPGTNTESRQDAV
AVATSRDGNFQLGGHEAEIASGPSFMDTLEAGVAQMNIKNGKHLLVSLSQEGELCCSEAG
QRPESLGQLETKCIASPSLDQGNESGFVDMCNLSVYDSKRNLSSDQQLIDLLECKSLESK
LILGRNHSDEEEEEEENEEENLDLAAGMRERPELSPLTEPTARMAGEKSLSGFLVDEAKK
GSLEARSQHPGPQGAFLPAACQCHCKHMERWTQGLENDEFEVEKPQGYNPDPYKSKANNV
TLGGKLTALPPELFQVKQELLKEPWKESAEGKQGFPTYLEGSELKAEDVDFESKDDYDRD
GNCQSQDYPGKYSEEESKNSTSGIVGDLRDSLQEARAPTIAQLLQEKTLYSFSEWPKDRV
IINRLDNICHVVLKGKWPSNQQYEPSAALPTPVLTSGAGPRSSLSEPEASEHVFSSGAAL
VAQMQKESFLASVFTKDEQKHRRPYEFEVERDAKTRGLEQFPATHGHPPIVLNGWHGESA
IDLSCPSEGSPGATSPFPVSASTPKIGAIGSLQGALGMDLSGILQAGLIHPVTGQIVNGS
LRRDDAATRRRRGRRKHVDGGVDLIFLKEQTLQAGILEVHEDPGQAPLSTSHPPEGPVPA
TSTPEPAPVAGSQAEKAIPSKSLLDWLRQQADCPLEVPGFGANFSDKPKQRRPRCKDTGK
LDVSSLSGEERVPAVPKEPGLRGFLPENKFNHTLPEPVLRDSGPRRRGRRPRSELLKAPA
LVADSPSGMGPLFMNGLIAGMDLVGLQNMRNMPSIPLTGLVGFPASFAAMPTGEEVKSTL
SMLPMVLPGMAAMPQMFGVGGLLSTPMATTCASAVPAPLSSTTKSGTSAAEKTAEDQPSG
RDVKTDTSAEDKPGPSPFSDQAEPAITTSSPVAFNPFLIPGVSPGLIYPSMFVSPGMGMA
LPAMQQARHSEIVGLESQKRMRKKTKGDNLDPSPEPVPGLEREPGSAQSRPESRAPAPPE
RGHAAQAGEGGPQDSNSVTN
NT seq
8163 nt
NT seq
+upstream
nt +downstream
nt
atgataatgaaaatacagaagaaagagaagcagttgtcaaatttaaaagttctgaatcac
tccccaatgtctgatgcctctgtcaattttgactacaaatccccctccccgtttgaccac
agcactgatcaggaggagaaaactgaagatgttgcccgtccctgtctgccccagaaggac
ctgtacgctgctgaagaggacgctgagacccttttccccaggaaaacgacatcccataac
gggatggaggacagtggaggaggaggcactggcgtgaagaagaaacggaagaaaaaggat
ccaggagagcaagaaggggcagcaaagggaagcaaggacagggagcccaagccaaagagg
aagcgtgaacctagagagccaaaggagcccaggaaggccaaggagcccaggaaggccaag
gagcccaaggagcccaagcagaaggacggggccaagaaggtgcggaagccccgggaggcc
tcgggccccaaggaggccaaagagaagaggagcggccctgactctgcagccaggacgaag
tccaagaaggccagcaaggagcaaggaccaaccccagtggagaaaaagaagaaaggaaaa
aggaaaagtgaaaccacagtggagagtttagagctggatcagggcctgccgaacccatcc
ctgcggagtcccgaggagtccactgagtctgcagacagccagaaacgacgctcaggacgg
caagtgaagcgcagaaaatacaacgaggacctggacttcaaagtggtggatgatgatggg
gaaaccatcgccgtccttggagccggccggacatctgccctctcagcttctacactggct
tggcaggcggaggagcctccagaagatgacgcaaacatcattgagaagatcctggcatct
aagactgtccaggaggttcacccgggagaacccccattcgacttggagctgttctacgtc
aagtataggaatttttcctacttacactgtaaatgggccacaatggaagaactcgaaaag
gatcctcgcatcgcacagaagatcaagcgatttaggaataaacaagcccagatgaagcac
atttttactgagcctgacgaagacttgttcaacccagactacgtggaggttgatcgcatc
ttggaggtggcccacaccaaggatgcagaaaccggagaggaagtgacgcattacctggtg
aagtggtgctcactgccttacgaagaaagtacgtgggagctggaggaggatgtggatcct
gcgaaagttaaagaattcgaatctctgcaagttctccctgaagttaagcatgtggagcga
cctgcctccgacgcctggcagaaacttgagaagtctcgggagtacaagaacagcaaccag
ctccgggagtaccagctggaggggatgaactggcttctttttaactggtataacagaaaa
aactgcattttggctgatgagatgggcctagggaaaacgatccagtccatcacattcctt
tcagaaatattcctcaggggaatccacggccctttcctcatcattgccccgctctccacc
atcaccaactgggagcgggagttccggacgtggacagagatgaacgccatcgtgtaccac
ggcagccagatcagcaggcagatgatccagcagtatgagatggtgtaccgagatgcacag
ggaaacccgctgtcaggagtcttcaagttccatgtcgtcattacaacgtttgagatgatc
ctggcagactgcccagagctgaagaagattcactggagctgtgtgatcattgatgaagcc
cacagattgaagaataggaattgcaaacttctggagggcctgaagctcatggccctggaa
cacaaggtgctgctcacagggacgcccttgcagaactcggtggaggagctcttcagtctg
ctcaacttcctggagccgtcacagtttccttcagaggactgctttctggaggagtttgga
gatctgaaacagaggagcagggtggaaaaactgcagtctatcctcaaaccaatgatgctt
cggcggctgaaagatgatgtgngaaagaaccttgctcccaaacaagagacgatcatcgaa
gtagagctgaccaatatccagaaaaagtactaccgtgccatcctggagaagaacttttcc
ttcctgaccaagggggccaatcagcacaacatgcccaatctcatcaacaccatgatggag
ctgaggaagtgctgtaaccacccctacctgatcaacggggcagaggagaaaattctggag
gacttccggaaaacccacagccctgatgcccccgactttcagctgcaggccatgattcaa
gcagcagggaagctggtgctgattgataaactgctccctaagctgattgctggcggccac
aaagtactcatcttctcccagatggtgcgctgtctcgacatcctggaagattatctcatc
cagagaagatacacctatgagcgaattgatgggcgagtacggggaaacctgcgccaggca
gccatcgaccggttctgtaagccagactcagaccgctttgtctttcttctgtgcacccga
gcgggaggcctggggatcaatctcacagctgccgatacctgcatcatatttgattcagac
tggaacccacaaaatgacttgcaggctcaggcccgatgtcaccggataggccagagtaaa
gccgtgaaggtgtatcgcctcattacacggaactcctacgagcgggaaatgtttgacaag
gccagcctgaagctgggtctggacaaggctgtccttcaggacatcaaccgaaagggcagc
acgaatggagtacagcagctttcaaaaatggaggtagaggacttgctccggaaaggtgct
tatggtgccttaatggatgaggaagacgaaggctccaagttctgtgaagaagacatagac
cagattctgcagaggagaacccacaccatcaccatccagtctgaagggaaaggatccact
tttgccaaggctagctttgtggcttcaggaaatagaacggatatttccttagatgaccca
aacttttggcagaaatgggctaaaattgctgaactggacactgaagcaaagagtgagaag
gaaagcttagtgatcgaccgcccgcgcgtgaggaagcagaccaaacactacaactctttt
gaggaggatgagctcatggagttttcagagttggacagcgactccgatgagaggcccacg
aggtccaggcgcctcagcgacaaaaccaggcgctacctccgcgccgagtgcttccgggtg
gagaagaacctgctcatatttggctggggccggtggaaggacattctgactcatgggcga
ttcaagtggcatctgaacgagaaggacatggagatgatttgccgggccctgctggtgtac
tgtgtcagcnnactacaaggggacgagaagatcaagagtttcatttgggaactgatcacg
cctaccaaagatgggcaggcccagaccctccagaaccactcagggctgtccgctccagtc
cccagagggaggaaggggaagaaaacgaagaaccagctgctgctcccagagttaaagaac
gcagactggctggccacctgcaaccccgaggtggtcttgcacgatgatggctacaaaaag
cacctcaaacagcactgcaacaaggtacttttgcgagtccggatgctgtactacttaaaa
gctgaaatactgggagaagcagcggataaagcatttgaaggaactccggccagggagctg
gacgttcctctgcccgacatcgactacgtggagatcccagtggattggtgggatgccgag
gccgacaagtcgcttctgattggcgtgttcaaacatggttacgagaggtacaatgccatg
agagcagacccagcactttgtttcctggagaaggttgggatgccagacgagaagtccctt
tctgcagagcagggtgttacagatgggacctcagacattcccgaaagaggcaacacagat
aaagaagacaatacagaagacaaagtagatggcctccagaaacaaatggagagttccagt
gatggaggtgatggcatttttggtgaaaagaaggatgacagccgggcagcccaggatggc
tccgacccagacaaatcaccctggccagtttcgtctgcactcacagctcgtctccgacgc
ctggtcaccatttaccagcgctgtaaccgcaaggagctctgccggcctgaaatcctggga
ccaggaaaccagggatactgggtccaggaagagatgttccggagatcctcagagatggat
ctcatcaacaaggaagcccaaaagaggtggactaggagagagcaagcagacttctacaga
gcagtgtcttcctttggtgtcgtttatgatcaagaaaagaaaacctttgactggacgcag
tttcgcatcatttcccgtctggacaagaagtcggacgagagcctggagcactacttctac
agcttcgtggccatgtgccgccacgtctgtcgtctgccagcctggaaggatggtggcccc
ccagatcccagcatctgcgttgaacccatcactgaagagcgggccgcgagaaccctgtac
cgcattgaactgttgcggaaggtccgggagcaagtgctgcagtgtcctcagctgcacgag
cgccttcagctctgcaggcccagcctctccctccccgtctggtgggagtgtggaaagcat
gatcgggacctattgatcggcactgccaagcacgggctgaaccgcaccgactactacatc
atgaccgacccccagctgtccttcctggacgcctacagaaactacgcccaacacaaaaga
accgacccccaggctccagggagtctctgttgcctttaccagaccaactccaaactgtat
gaatctcttgcatatactcaaatgagcaggacttccgagtcccttgaaaatgaacctgag
aatctagtgaaaatagaaggtagggatgatcatcttggtccacctcggggcagcttatct
gacatgacttgtgaaaactttatttctaaagttcaggatgtcatttccatcacccatgat
gagagtctgctgcctgagtccttggagagcatgatgtatggtaagaaagcactaaaccag
gagccagtctcttttcaggagagcccaggtaccaatactgaatccagacaagatgccgtg
gctgttgcaacaagcagagatgggaacttccagcttggtggccacgaggcagaaatagcc
tcaggcccctcttttatggatacattagaagcaggagtagctcaaatgaacattaaaaat
ggaaaacatttgctggtgtctctttcacaggaaggggaactctgctgcagcgaggcaggg
cagaggcctgaaagccttgggcagctggaaaccaaatgcatagcctccccttccttggac
caaggaaatgagagcgggtttgttgacatgtgcaatctgagtgtctatgactccaaaaga
aacctgtcatcagatcagcagttgattgatttattagaatgcaaaagtttagaaagtaaa
ttgattttgggtcggaaccacagtgatgaggaggaggaagaggaggaaaatgaggaggaa
aacctagacctggccgcaggcatgcgggaaaggccggaattgtcgcctcttaccgagccc
actgctcgtatggcaggggagaagagcctcagcggctttcttgtggacgaagccaagaaa
ggaagcctggaggccagaagccagcatcccggaccgcagggcgcttttcttcccgcagcc
tgtcagtgtcactgcaaacacatggagaggtggacgcagggcctcgagaatgacgagttt
gaagtggagaaaccccagggttacaacccagacccatacaaaagcaaagccaataatgtc
acactggggggcaagctcactgctcttccaccagagctgtttcaggtgaagcaggaactt
ttgaaagaaccctggaaagaaagtgcagaagggaaacaaggtttccctacgtatctcgaa
gggagtgaactcaaggcggaagacgtggattttgagagtaaagatgattatgatagagac
gggaactgccagagtcaagattatccagggaaatactctgaggaggagagcaagaactcg
acctcgggcatcgtaggagacctcagggacagcctgcaggaggcacgggctcccaccatt
gctcagctgctccaggagaaaaccctctattccttctccgagtggccgaaggatcgcgtg
ataatcaaccgcctggataacatctgccatgtggtgttaaaggggaagtggccctccaac
cagcagtatgagccctcggccgcgctgcccacccccgtgttaaccagcggcgctggtccc
cgcagcagcctttcagagccagaggcatcagaacacgtcttcagcagtggcgcagcgttg
gtggcccagatgcagaaggagagcttcttggcttcagtattcacaaaggatgaacagaag
cacaggcgtccttatgagttcgaggtggagagggacgcaaagacccggggcctggagcag
ttccccgccacccacgggcacccccccatcgtcctcaacggctggcacggagagtcagcg
atagacctgtcctgcccatcggaggggtccccgggggccacatcccctttcccagtgagc
gccagcacccctaagattggggctatcggttcgcttcaaggagcccttggcatggacttg
tctgggattctgcaagccggcctgatccatccagtgactggacagatcgtcaacggaagc
ctcaggagagatgacgctgccaccaggaggcggagagggaggcggaagcatgtagacgga
ggcgtggacctcatctttctgaaggagcagacactccaggcggggatcttggaggtccac
gaagacccagggcaggcccccctgagcacctcacaccctcctgaagggccagtgcctgcc
acgtcgaccccggagccggccccggtagccggcagccaggccgagaaagccattcccagc
aagagcctgctggactggctgcggcagcaggctgactgccccctcgaggtccccggcttc
ggcgcgaatttttcagacaaacccaagcagaggagaccacgctgtaaggatactggaaaa
ttagacgtcagctccctgagtggggaagagagggttcctgccgtccccaaggagccaggc
ctgagggggtttctcccggaaaacaagttcaatcacacccttcctgagcctgttctccga
gactcaggcccccgccggaggggcaggcggccccggagcgagctcctgaaggctcccgcc
ctcgtggcggactccccctccgggatggggcctctgttcatgaacggcctgatcgccggg
atggacctggtcggacttcagaacatgagaaacatgcccagcatccccctcacggggctg
gtggggttcccggccagctttgcagcgatgcccacgggcgaggaggtcaagagcacgttg
agcatgctgcccatggtgctgccgggcatggccgccatgccccagatgtttggggtcggg
gggctcctcagcacccccatggccaccacctgcgcctcggctgtgccagcgcctttgtca
agcacaacgaagagtggcacgtcggcggctgaaaagactgcagaagaccagcccagcggc
cgcgatgtcaaaacggacacgtcagctgaagacaagcccggtcctagtccattttccgat
caggccgaacccgcaataactacgagtagtcctgtggcttttaacccgtttctcatccca
ggagtgtcccccggactcatttacccatccatgtttgtctcccccggcatgggcatggct
ctgccggccatgcagcaggccagacactcggaaatagtaggtctggagagccagaagagg
atgaggaagaaaacaaaaggggacaacctggaccccagcccagagcctgtacccgggttg
gagagagagccgggcagcgcccagagccgccccgaatccagggcccccgcgcccccagag
agaggacacgcagcacaggccggcgaagggggcccccaagactctaacagtgtcaccaat
tag
DBGET
integrated database retrieval system
