Balaenoptera musculus (blue whale): 118881361
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Entry
118881361 CDS
T09887
Symbol
RBFOX1
Name
(RefSeq) RNA binding protein fox-1 homolog 1 isoform X1
KO
K14946
RNA binding protein fox-1
Organism
bmus
Balaenoptera musculus (blue whale)
Brite
KEGG Orthology (KO) [BR:
bmus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bmus03041
]
118881361 (RBFOX1)
Spliceosome [BR:
bmus03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
118881361 (RBFOX1)
BRITE hierarchy
Motif
Pfam:
Fox-1_C
RRM_1
RRM_5
Motif
Other DBs
NCBI-GeneID:
118881361
NCBI-ProteinID:
XP_036682091
EnsemblRapid:
ENSBMSG00010019897
LinkDB
All DBs
Position
15:54357619..55854964
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AA seq
466 aa
AA seq
DB search
METAQRTHASGTYSFLDQTQHSDIKVDCNTCVEIEDRKVSRQQMNCEREQLRGNQEAAAA
PDTMAQPYASAQFAPPQNGIPAEYTAPHPHPAPEYTGQTTVPEHTLNLYPPAQSHSEQSA
ADTSAHTVSGTATQTDDAAPTDGQPQTQPSENTENKSQPKRLHVSNIPFRFRDPDLRQMF
GQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNATARVMT
NKKTVNPYTNGWKLNPVVGAVYSPEFYAGTVLLCQANQEGSSMYSAPSSLVYTSAMPGFP
YPAATAAAAYRGAHLRGRGRTVYNTFRAAAPPPPIPAYGGVVYQDGFYGADIYGGYAAYR
YAQPTPATAAAYSDRNQFVFVAADEISCNTSAVTDEFMLPTPTTTHLLQPPPTALVPCPK
VPAPAQTSEELSCTLPGLCCQAAENLTASPPLLQFMFKVIVAQERK
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atggaaactgctcaaagaactcatgcaagtggaacttacagcttccttgatcagactcaa
cattcagatatcaaagtagactgcaatacctgtgtggaaatagaggacagaaaggtttca
agacaacagatgaattgtgaaagagagcagctaaggggtaatcaggaagcagcagctgcc
cctgacacaatggctcagccttacgcttcggcccagtttgccccccctcagaacggcatc
cccgcggaatacacggcccctcatccccaccccgcgccagagtacacgggccagaccacc
gttcccgagcacacgttaaacctgtaccctcccgcgcagtcgcactcggagcagagcgca
gcggacacgagcgcgcacaccgtctcgggcaccgccacacagacagatgatgcggcgccc
acggatggtcagccccagacacaaccttccgaaaatacggaaaacaagtcccagcccaag
aggctgcacgtctccaacatccccttcaggttccgggatcccgacctccgacaaatgttt
ggccaatttggtaaaatcttagatgttgaaattatttttaatgagcgaggctcaaaggga
tttggtttcgtaactttcgaaaatagtgccgatgcggacagggcgagggagaaattacac
ggcaccgtggtagagggccgtaaaatcgaggtaaataatgccacagcacgtgtaatgaca
aataaaaagactgtcaacccttatacaaatggctggaaattgaatccagttgtgggtgca
gtgtacagtcccgaattctatgcaggcaccgtgctgttgtgccaggcaaaccaggaggga
tcttccatgtacagtgcccccagctcacttgtatatacctccgcaatgcccggcttcccg
tatccagccgccaccgccgcggccgcctaccgaggggcgcacctgcgaggccgcggccgc
accgtgtacaacaccttccgggccgcggcgcccccgcccccgatcccggcctacggcggt
gttgtttaccaggatggattttatggtgcagacatttatggtggttacgctgcatatcgc
tacgcccagcccacccccgccactgccgctgcctacagtgacagaaatcagttcgtcttc
gttgcagcagatgaaatttcttgtaacacctctgcagttacggacgagtttatgctaccg
acccctaccaccacacacttgctccagcccccacctacggcgttggtgccatgccccaag
gttccagccccagcacagacttcagaggagctaagctgcacacttccaggcctctgctgt
caggcagctgagaatctgactgcctctcctcccctattacaatttatgtttaaagtcata
gtcgcccaggaaagaaaatag
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