Balaenoptera musculus (blue whale): 118881453
Help
Entry
118881453 CDS
T09887
Symbol
TRIM56
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM56 isoform X1
KO
K12026
tripartite motif-containing protein 56 [EC:
2.3.2.27
]
Organism
bmus
Balaenoptera musculus (blue whale)
Brite
KEGG Orthology (KO) [BR:
bmus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bmus04121
]
118881453 (TRIM56)
Enzymes [BR:
bmus01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118881453 (TRIM56)
Ubiquitin system [BR:
bmus04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
118881453 (TRIM56)
BRITE hierarchy
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4
zf-B_box
zf-C3HC4_3
zf-C3HC4_2
zf-RING_2
zf-RING_5
zf-C3HC4_4
zf-RING_11
DUF3583
Motif
Other DBs
NCBI-GeneID:
118881453
NCBI-ProteinID:
XP_036682284
EnsemblRapid:
ENSBMSG00010010880
LinkDB
All DBs
Position
15:complement(80885089..80888769)
Genome browser
AA seq
778 aa
AA seq
DB search
MSAGRREAALYLKRPEENSWPFRMVSQGSSPSLLEALSSDFLACKICLEQLRVPKTLPCL
HTYCQDCLGQLAEGSHVRCPECRESVPVPPTGVAAFKSNFFVNGLLDLVKARAGGDLRAG
KPACALCPLMGGASAGGPATARCLDCADDLCQACADGHRCTRQTHSHRVVDLVGYRAGWY
DEEARERQAAQCPQHPGESLRFLCQPCSQLLCRECRLDPHLDHPCLPLAEAVRARRPGLE
ELLAGVDSNLAELEATRLEEKEALARLREQAAKVGTQVEEAAEGVLRALLAQKQEVLGQL
RAHVEAAEEAARERLGELESREQVAREAAAFARRVLSLGREAEILSLEGAIAQRLQQLQR
CPWMPGSAPCLLPRLELHPGLLDQKCHLLRLSFEEQQPRKASGKDGARSQGGDETQPQSR
DGAPTPKQDGAQTPQEDGAQTLKAERAETPQEDGAKTPKEGRAQTPQEDGGAQSPRGGRS
NKKRKFKGRLKSISREPSPAPGPNLEGSGLLPRPVFFCSFPTRMPGDKRSPRITGLCPFG
SREILVADEQNRALKRFSLNGDYTGAVPVPEGCSPCSVAALQDAVAFSAGARLYLIRPNG
EVQWRRALSLCQASHAVAAMPSGDRVAVSVSGHVEVYNMEGSLATRFIPGGKASRGLRAL
VFLTTSPQGNFVGSDWQQNSLVVCDGLGQVIGEYRGPGLHGCQPGSVSVDKKGYIFLTLR
EVNKVVILDPKGSLLGDFLTAYHGLEKPRVTTMVDGRYLVVSLSNGTIHVFRVRPPDS
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcagggaggagggaggcagctctttatctcaagagaccagaagaaaattcctgg
ccattcagaatggtttcccagggctcctcgccctccctgctggaggccctgagcagcgac
ttcctagcctgtaaaatctgcctggagcagctgcgggtgcccaaaacgttgccctgcctg
catacctactgccaggactgcctgggccagttggccgagggcagccacgtccgatgccct
gagtgccgcgagtccgtgcctgtgccgcccacgggcgtggctgccttcaagagcaacttc
ttcgtcaacgggctcctggatttggtgaaggcccgagccggtggcgacctgcgcgcaggg
aagccggcctgtgcgctgtgcccgctgatggggggcgccagcgccggggggccagccaca
gcccggtgcctggactgcgccgacgacttgtgccaggcctgtgccgatgggcaccgctgc
acccggcagacccacagccaccgcgtggtggacctggtgggctacagggcagggtggtac
gacgaggaggcccgggagcgccaggcggcccagtgtccccagcacccgggggagtccctg
cgcttcctttgccagccctgctcccagctgctgtgccgggagtgtcgcctggacccccac
ctggaccacccctgcctgcccctggccgaggctgtgcgtgcccggaggcccggcctcgag
gagctcctggcgggcgtggacagcaatctggctgagctggaggccacccggctggaggaa
aaggaagccttggcccgtctgcgggagcaggcggccaaggtgggcacgcaggtggaagag
gcggccgagggggtcctccgggccctcctggcccagaagcaggaggtgctggggcagcta
cgggcccacgtggaggctgccgaggaggctgctcgggagaggctgggggagctggagagc
cgcgaacaggtggccagggaggcggccgcctttgcccgtcgcgtgctcagcctgggtcgc
gaggccgagatactctcgctggagggggcgattgcccaaaggcttcagcagctgcagcgc
tgtccctggatgcctgggtcagctccctgcctgctgccccggctggagctccatcctgga
ctcctggaccagaagtgccacctgctgaggctctcctttgaggagcagcagccccggaag
gccagcgggaaggacggagccagaagccagggaggcgacgaaacccagccccagagcagg
gatggagccccgaccccgaagcaggacggagcgcagacgccccaagaagatggagcccag
accctaaaggcggagagagccgagactccccaagaagacggagccaagaccccgaaagag
ggcagagcccagacaccccaagaagacggaggagcccagtccccaaggggtggcagatcc
aacaagaagaggaaattcaaaggcaggctcaagtccatttctcgggagcccagcccagca
cctgggccaaacctggagggctctggcctcctccccaggcccgtctttttctgcagcttc
cccacgcggatgccgggggacaagcggtctccccggatcactgggctctgtccctttggc
tcccgggagatcctggtggcagacgagcagaacagggccctgaagcgcttctccctcaat
ggcgactacacgggcgcggtgcccgtccctgagggctgctcgccatgcagcgtggccgcc
ctgcaggacgccgtggccttctcggctggcgctcggctctatctcatccgccccaacggc
gaggtgcagtggcgccgggcgctgagcctctgccaggccagccacgccgtggccgccatg
ccgagcggggaccgggtggccgtcagcgtgtcaggccatgtggaggtgtacaacatggaa
ggcagcctggccacccggtttatccctgggggcaaggccagccggggcctgcgggcactg
gtgttcctgaccaccagcccccagggcaatttcgtggggtcggattggcagcagaatagc
ttggtggtctgtgacgggctgggccaggtgattggggagtaccgggggccgggcctgcac
ggctgccagccaggttccgtgtccgtggataagaagggctacatctttctgacccttcga
gaggtcaacaaggtggtgatcctcgatccgaaggggtcgctgctcggggacttcctgacg
gcctatcacggcctggaaaagccccgggtgaccaccatggtggatggcaggtacctggtc
gtgtccctcagtaatgggaccatccatgtctttcgggtccgccctcctgacagttaa
DBGET
integrated database retrieval system
