KEGG   Balaenoptera musculus (blue whale): 118882963
Entry
118882963         CDS       T09887                                 
Symbol
SMNDC1
Name
(RefSeq) survival of motor neuron-related-splicing factor 30
  KO
K12839  survival of motor neuron-related-splicing factor 30
Organism
bmus  Balaenoptera musculus (blue whale)
Pathway
bmus03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:bmus00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    118882963 (SMNDC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:bmus03041]
    118882963 (SMNDC1)
Spliceosome [BR:bmus03041]
 Complex A
  U2 snRNP components
   U2 related factors
    118882963 (SMNDC1)
 Complex B
    118882963 (SMNDC1)
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    118882963 (SMNDC1)
Motif
Pfam: SMN_Tudor TUDOR
Other DBs
NCBI-GeneID: 118882963
NCBI-ProteinID: XP_036685298
EnsemblRapid: ENSBMSG00010020575
LinkDB
Position
16:19817777..19829089
AA seq 238 aa
MSEDLAKQLASYKAQLQQVEAALSGNGENEDLLKLKKDLQEVIELTKDLLSTQPSETLAS
SDNFASTQPTHSWKVGDKCMAIWSEDGQCYEAEIEEIDEENGTAAITFAGYGNAEVTPLL
NLKPVEEGRKAKEDSGNKPMSKKEMIAQQREYKKKKALKKAQRIKELEQEREDQKVKWQQ
FNNRAYSKNKKGQVKRSIFASPESVTGKVGVGTCGIADKPMTQYQDTSKYNVRHLMPQ
NT seq 717 nt   +upstreamnt  +downstreamnt
atgtcagaggatctagcaaagcaactggcaagctacaaagctcaactccagcaagttgaa
gctgcgctgtctggaaatggagaaaacgaagatttgctaaaattaaagaaagatttgcaa
gaagttatagaactaaccaaagaccttctgtcaactcaaccttctgaaacgctggcaagt
tcagacaattttgcttctactcagcccactcattcttggaaagtaggagacaagtgtatg
gcaatctggagtgaagatggacagtgttatgaagcggagattgaggagatagatgaagaa
aacggcaccgctgcaatcacttttgctggctatggcaatgctgaagtgactccactgttg
aacctcaagcctgtagaagaaggaaggaaggcaaaggaggacagtggcaacaaacccatg
tcaaaaaaagaaatgattgcccagcagcgtgaatataaaaagaagaaagctttgaaaaaa
gcacagagaataaaagaacttgaacaagaaagagaggaccagaaggtgaaatggcagcag
ttcaacaacagagcctattctaaaaacaaaaaaggccaggtaaagaggagtatttttgct
tcacctgagagtgtaactggcaaagttggagtaggaacttgtggaattgctgataaacct
atgacacagtatcaagatacctctaaatacaatgttaggcatttgatgcctcaataa

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