Balaenoptera musculus (blue whale): 118884440
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Entry
118884440 CDS
T09887
Symbol
UPF3A
Name
(RefSeq) regulator of nonsense transcripts 3A isoform X1
KO
K14328
regulator of nonsense transcripts 3
Organism
bmus
Balaenoptera musculus (blue whale)
Pathway
bmus03013
Nucleocytoplasmic transport
bmus03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bmus00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
118884440 (UPF3A)
03015 mRNA surveillance pathway
118884440 (UPF3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bmus03019
]
118884440 (UPF3A)
Messenger RNA biogenesis [BR:
bmus03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
118884440 (UPF3A)
mRNA cycle factors
P-body specific factors
118884440 (UPF3A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Smg4_UPF3
Motif
Other DBs
NCBI-GeneID:
118884440
NCBI-ProteinID:
XP_036687985
EnsemblRapid:
ENSBMSG00010020774
UniProt:
A0A8B8VTG6
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All DBs
Position
18:79615462..79644855
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AA seq
492 aa
AA seq
DB search
MRSEKEGEVGPGVAVTTRGPSGKEKPSPTESHFRRESQRREPEAPVASSSGCGGGAVKPR
EEKRTVLSKVVIRRLPPSLTKEQLEEQLHPLPAHDYFGLFTADLSLHPHLYSRAYINFRN
PDDILLFRDRFDGYIFIDSKGLEYPAVVEFAPFQKTAKKKLKKKDAQAGSIEDDPEYKKF
LETYCVEEEKTSANPETLLGDIEAKTRELIARRTTPLLEYIKNRKLEKQRIREEKREERR
RRELERKHLWEEEIRRRREEEIRRRREEEKCKRKAAEKQKKTAEKEVRMKLLKKSEKGEE
SSTEKPKERGEEIDTRDGKQEPGPSCVVMKPKTLESSLEELREKSQNDSDKEQRDMERRF
REKELEAQRYHLDDSRKHRAHHELDKFSGRSAEELKRGKGFTPDRGKKGSQDGGGPVGAA
ETPGREKSEGGLAAEKERTGSKDRPGLQLYQPRGGIRARECDGRSPEEGRDRRRGEVEDS
TGAGAEKSKEAE
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgcgctcggagaaggagggagaggtgggcccaggggtggccgttactacgcggggtccg
agcgggaaggagaagccgtcgcccacagaaagccacttccgccgggagtctcagcggcgg
gagcctgaagcgccggtagcctcctcctccggctgtggtggcggtgcagtcaaacctcgc
gaggaaaagaggacggtcctcagcaaggtggtcatccggcggcttcctcccagcctcacc
aaggagcagctggaagagcagcttcacccgctgcccgcacatgactacttcgggctcttt
actgctgatctcagtcttcatcctcatctctattcaagagcgtacattaattttagaaat
cctgatgacatcctgctttttagagatcgttttgatggatatatcttcattgacagtaaa
ggcctagaatatcctgcagtggtagaatttgctccattccagaagacagccaaaaagaag
ctaaagaaaaaagacgcccaagccggaagcattgaagatgatccagaatataagaagttt
ttagaaacttactgtgtggaggaggagaaaactagtgccaatcctgaaactcttctggga
gacatagaggcaaagacaagagaacttattgctagaagaaccacgcctcttttggaatat
attaaaaatagaaaattagaaaagcagagaattcgagaagaaaagcgagaagaacggagg
aggagggagttggaaaggaaacacttatgggaagaagagataagaaggagaagggaagaa
gagataagaaggagaagggaagaggagaaatgtaagaggaaagcagcagaaaaacagaag
aaaactgctgagaaagaagtaaggatgaagcttctcaagaaatcagaaaagggagaggag
tcaagcactgagaagccaaaagaaagaggagaggaaattgacaccagagatgggaaacag
gaacccggtcccagctgtgtagtcatgaagcccaagaccttggagagctcgctggaggaa
ctcagggaaaagtcacaaaatgacagtgataaagagcaaagggacatggagagaagattc
cgagaaaaagaacttgaagcacaaagataccacttggatgacagcagaaaacatagagct
caccatgagttggataagttttcaggaagaagcgcagaagagctgaaaagggggaaagga
ttcaccccagaccgagggaagaaggggagccaggatgggggcggccctgtgggggcagca
gagacaccaggaagggagaagagtgaaggtgggctggcagccgagaaggagcgcacggga
agcaaggaccgaccaggcttgcagctgtaccagcccagaggtggcatccgagcccgtgaa
tgtgatggaagatcccctgaggagggccgtgacaggaggaggggtgaggtggaagattca
acaggggctggagctgagaagagcaaagaggcagagtga
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integrated database retrieval system
