Balaenoptera musculus (blue whale): 118888444
Help
Entry
118888444 CDS
T09887
Symbol
UPF3B
Name
(RefSeq) regulator of nonsense transcripts 3B isoform X1
KO
K14328
regulator of nonsense transcripts 3
Organism
bmus
Balaenoptera musculus (blue whale)
Pathway
bmus03013
Nucleocytoplasmic transport
bmus03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bmus00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
118888444 (UPF3B)
03015 mRNA surveillance pathway
118888444 (UPF3B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bmus03019
]
118888444 (UPF3B)
Messenger RNA biogenesis [BR:
bmus03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
118888444 (UPF3B)
mRNA cycle factors
P-body specific factors
118888444 (UPF3B)
BRITE hierarchy
Motif
Pfam:
Smg4_UPF3
RRM_1
Motif
Other DBs
NCBI-GeneID:
118888444
NCBI-ProteinID:
XP_036695334
EnsemblRapid:
ENSBMSG00010021508
LinkDB
All DBs
Position
X:complement(100510573..100526898)
Genome browser
AA seq
490 aa
AA seq
DB search
MRSETVAMKEEKEHRPKEKRVTLLTPPGATGSVCGASGDSIKREDKQDRNKEKKEALSKV
VIRRLPPTLTKEQLQEHLQPMPEHDYFEFFSNDTSLYPHMYARAYINFKNQEDIILFRDR
FDGYVFLDNKGQEYPAIVEFAPFQKAAKKKTKKRDTKVGTIDDDPEYRKFLESYAADNEK
MTSTPETLLEEIEAKNRELIAKKTTPLLSFLKNKQRMREEKREERRRREIERKRQREEER
RKWKEEEKRKRKDIEKLKKIDRVPERDKLKDEPKIKVHRFLLQAVNQKNLLKKPEKGDEK
ELDKREKAKKLDKENLSDERASGQSCPLPKRSDGEFKDEKPKRPEDESGREYRERERDYE
RDQERILRERERLKRQEEERRRQKERYEKEKAFKRKEEEMKKEKEALRDKGKKPESTEPV
GSSEKTEKKEEVVKRDRIRNKDRPAMQLYQPGARSRNRLCPHDDSTKSGDSTIEKKQESG
ISHRKEGSEE
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgaggagcgaaaccgtggccatgaaggaggagaaggagcataggcctaaggagaagcga
gtaaccctcttgactcccccgggggctacaggcagcgtctgtggggcttcgggggacagc
atcaaacgggaagataagcaggatcggaacaaggagaagaaagaggcgttgagcaaggtg
gtaatacggagattaccgcccactttgaccaaggagcagcttcaggaacatcttcagcct
atgcctgagcatgattattttgagtttttttctaatgatactagcctgtatcctcatatg
tatgccagagcatacatcaactttaaaaaccaggaggacattattttgttcagggatcgt
ttcgatggttatgtattccttgacaataaaggtcaggaatatcctgccatagtagaattt
gcaccttttcaaaaagctgcaaaaaagaagactaagaaaagagatactaaagttgggact
atcgatgatgatccagaatatagaaaatttttggaaagttatgctgcagataatgagaaa
atgacatctactccagagacactgctagaggaaatagaagcaaaaaatagagaattaata
gctaaaaagacaaccccacttttgagcttcctgaaaaacaagcagaggatgagagaagaa
aagagagaagaaagaaggaggcgagaaatagaaagaaaaagacaaagagaagaagagagg
aggaaatggaaagaagaagagaaacgaaaaaggaaagatatagaaaagctaaagaagata
gacagagttccagaaagggacaaattaaaggatgaaccaaagattaaggtacacaggttt
ctgttacaagctgtgaatcagaaaaatctgctcaagaagccagaaaaaggcgatgaaaaa
gaattggacaaaagagaaaaggccaagaaattggacaaagagaatctgagtgatgaaaga
gccagtgggcagagttgtccattgcccaaacgttccgatggtgaatttaaagatgaaaag
cctaagagacctgaagatgagagtggcagagaatacagggagagggagcgggattatgaa
cgagaccaagagcgcatactgcgggaaagagagaggctgaagcggcaggaggaagagcgc
cgcaggcagaaggagcgctatgagaaagagaaggcttttaaaagaaaggaagaagaaatg
aaaaaagagaaagaagcccttcgggataaaggaaagaagcctgaaagtacagaaccagta
ggcagctcagaaaaaactgaaaagaaagaggaagtggttaagagagatcgcataagaaac
aaggatcgcccagcaatgcagctttaccaaccaggagctcgaagccgaaatcgactctgt
ccccatgatgacagcaccaagtctggagattcaaccatagaaaaaaagcaggaaagtggt
attagccatagaaaagaaggaagcgaggagtga
DBGET
integrated database retrieval system
