Balaenoptera musculus (blue whale): 118889575
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Entry
118889575 CDS
T09887
Symbol
RORA
Name
(RefSeq) nuclear receptor ROR-alpha isoform X1
KO
K08532
RAR-related orphan receptor alpha
Organism
bmus
Balaenoptera musculus (blue whale)
Pathway
bmus04659
Th17 cell differentiation
bmus04710
Circadian rhythm
bmus05017
Spinocerebellar ataxia
bmus05321
Inflammatory bowel disease
Brite
KEGG Orthology (KO) [BR:
bmus00001
]
09150 Organismal Systems
09151 Immune system
04659 Th17 cell differentiation
118889575 (RORA)
09159 Environmental adaptation
04710 Circadian rhythm
118889575 (RORA)
09160 Human Diseases
09163 Immune disease
05321 Inflammatory bowel disease
118889575 (RORA)
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
118889575 (RORA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bmus03000
]
118889575 (RORA)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
bmus03310
]
118889575 (RORA)
Transcription factors [BR:
bmus03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
118889575 (RORA)
Nuclear receptors [BR:
bmus03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
118889575 (RORA)
BRITE hierarchy
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
118889575
NCBI-ProteinID:
XP_036697285
EnsemblRapid:
ENSBMSG00010001304
LinkDB
All DBs
Position
2:72726489..73450006
Genome browser
AA seq
523 aa
AA seq
DB search
MESAPAAPDPAACEPGSSGADAAAGSRETPLNQESARKSEPPAPVRRQSYSSTSRGISVT
KKTHTSQIEIIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQSNATYSCPRQKNCLIDRT
SRNRCQHCRLQKCLAVGMSRDAVKFGRMSKKQRDSLYAEVQKHRMQQQQRDHQQQPGEAE
PLTPTYSISANGLTELHDDLSSYIDGHTPEGSKADSAVSSFYLDIQPSPDQSGLDINGIK
PEPICDYTPASGFFPYCSFTNGETSPTVSMAELEHLAQNISKSHLETCQYLREELQQITW
QTFLQEEIENYQNKQREVMWQLCAIKITEAIQYVVEFAKRIDGFMELCQNDQIVLLKAGS
LEVVFIRMCRAFDSQNNTVYFDGKYASPDVFKSLGCEDFISFVFEFGKSLCSMHLTEDEI
ALFSAFVLMSADRSWLQEKVKIEKLQQKIQLALQHVLQKNHREDGILTKLICKVSTLRAL
CGRHTEKLMAFKAIYPDIVRLHFPPLYKELFTSEFEPAMQIDG
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atggagtcagctccggcagcccccgaccccgccgcctgcgagccgggcagcagcggcgcg
gacgcggccgccggctccagggagaccccgctgaaccaggaatccgcccgcaagagcgag
ccgcccgccccggtgcgcagacagagctattccagcaccagcagaggtatctcagtaaca
aagaagacacatacatctcaaattgaaattattccatgcaagatctgtggagacaaatca
tcaggaatccattatggtgtcattacatgtgaaggctgcaagggctttttcaggagaagt
cagcaaagcaatgccacctactcctgtcctcgtcagaagaactgtttgattgatcgaacc
agtagaaaccgctgccaacactgtcgattacagaaatgccttgccgtggggatgtctcga
gatgctgtaaaatttggccgcatgtcgaaaaagcaacgagacagcttgtacgcagaagta
cagaaacaccggatgcagcagcagcagcgagaccaccaacagcagcctggagaggccgag
ccgctgactcccacctacagcatctcggccaacgggctcacggagcttcacgacgacctc
agcagctacatcgacgggcacacccccgagggcagcaaggcagactctgccgtcagcagc
ttctacctggacatacagccttccccggaccagtcaggtcttgatatcaacggaatcaaa
ccagaaccaatatgtgactacacaccagcatcaggcttctttccctactgctctttcacc
aatggagagacgtccccaactgtgtccatggcagaactagaacaccttgcacagaatata
tctaagtcacatctggaaacttgccaatacttgagagaagagctccagcagataacgtgg
cagacctttctgcaggaggagattgagaattaccaaaacaagcagcgggaggtaatgtgg
caattgtgtgccatcaaaattacagaagctatacagtatgtggtggagtttgccaaacgc
attgatggatttatggaactgtgtcaaaacgatcaaattgtgcttctcaaagcaggttct
ctggaggtggtatttatcagaatgtgccgtgcctttgactctcagaacaataccgtgtac
tttgatgggaaatatgctagccccgacgtcttcaaatccttaggttgtgaagactttatt
agctttgtatttgaatttggaaagagtttatgttctatgcacctgactgaagatgaaatt
gcattgttttctgcatttgtcctgatgtcagcagatcgctcatggctgcaggaaaaggta
aaaattgaaaagctgcaacagaaaattcagctagctcttcaacacgtcctacagaagaat
caccgagaagatggaatactaacaaagttaatatgcaaggtgtctacattaagagcctta
tgtggacgacatacagaaaagctaatggcgtttaaagcaatatacccagacattgtgcga
cttcattttcctccattatacaaggaattgttcacttcagaatttgagccagcaatgcag
attgatgggtaa
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