Balaenoptera musculus (blue whale): 118900509
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Entry
118900509 CDS
T09887
Symbol
CNOT4
Name
(RefSeq) CCR4-NOT transcription complex subunit 4 isoform X1
KO
K10643
CCR4-NOT transcription complex subunit 4 [EC:
2.3.2.27
]
Organism
bmus
Balaenoptera musculus (blue whale)
Pathway
bmus03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bmus00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
118900509 (CNOT4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bmus03000
]
118900509 (CNOT4)
03019 Messenger RNA biogenesis [BR:
bmus03019
]
118900509 (CNOT4)
04121 Ubiquitin system [BR:
bmus04121
]
118900509 (CNOT4)
Enzymes [BR:
bmus01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118900509 (CNOT4)
Transcription factors [BR:
bmus03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
118900509 (CNOT4)
Messenger RNA biogenesis [BR:
bmus03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
118900509 (CNOT4)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
118900509 (CNOT4)
Ubiquitin system [BR:
bmus04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
118900509 (CNOT4)
BRITE hierarchy
Motif
Pfam:
zf-RING_4
RRM_1
zf-C3HC4_3
zf-UDP
zf-C3HC4_2
zf-RING_2
Rtf2
Nup35_RRM_2
DZR_2
zf-CCCH_2
Torus
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
118900509
NCBI-ProteinID:
XP_036718802
EnsemblRapid:
ENSBMSG00010019140
LinkDB
All DBs
Position
9:18348203..18490077
Genome browser
AA seq
714 aa
AA seq
DB search
MSRSPDVKEDPVECPLCMEPLEIDDINFFPCTCGYQICRFCWHRIRTDENGLCPACRKPY
PEDPAVYKPLSQEELQRIKNEKKQKQNERKQKISENRKHLASVRVVQKNLVFVVGLSQRL
ADPEVLKRPEYFGKFGKIHKVVINNSTSYAGSQGPSASAYVTYIRSEDALRAIQCVNNVV
VDGRTLKASLGTTKYCSYFLKNMQCPKPDCMYLHELGDEAASFTKEEMQAGKHQEYEQKL
LQELYKLNPNFLQLSTGSVDKNKNKVTPLQRYDTPIDKPSDSLSIGNGDNSQQISNSDTP
SPPPGLSKSNPVITISSSNHSARSPFEGAVTESQSLFSDNFRHPNPIPSGLPPFPSSPQT
SSDWPTAPEPQSLFTSETIPVSSSTDWQAAFGFGSSKQPEDDLGFDPFDVTRKALADLIE
KELSVQDQPSLSPTSLQNSSSHTTTAKGPGSGFLHPAAPTNANSSLNSTFSVLPQRFPQF
QQHRAVYNSFSFPGQAARYPWMAFPRNSIMHLNHTANPTSNSNFLDLNLPPQHNTGLGGI
PIADNSSSVESLNMKEWQDGLRALLPNININFGGLPNSSSPSNASHSAPTSNTATTDSPS
WDSPGSWTDPAIITGIPASSGNSLDSLQDDNPPHWLKSLQALTEMDGPTAAPSQAHHSAP
FSTQIPLHRASWNPYPPPSNPSSFHSPPPGFQTAFRPPSKTPTDLLQSSTLDRH
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgcagtcctgatgtgaaggaagaccctgtggaatgtcctctttgcatggagccc
ttggagatagatgatatcaactttttcccttgcacctgtggctaccagatttgccgattt
tgttggcatcgaattcgcactgatgaaaatgggctttgtcctgcatgcagaaagccatat
ccagaagacccagcagtttataaaccactctcccaggaagaactgcaaaggataaagaat
gagaaaaaacagaaacaaaatgagagaaaacagaaaatatcagaaaatcgcaaacatttg
gctagtgtacgtgttgtacaaaaaaacctcgtctttgttgtaggtctgtctcagcgccta
gcagacccagaggttttaaaacgaccagaatattttgggaagtttggtaaaatacataaa
gttgtcatcaataatagcacatcatatgcaggctcacagggtccaagcgccagtgcttac
gtaacctatatccggtcggaagatgctctcagagccatacagtgtgtcaacaatgtggtg
gtagatggcagaacacttaaggcatctctaggtacaacaaaatactgcagttacttctta
aagaatatgcagtgtccaaagcctgactgcatgtacctacatgaattgggggacgaggcg
gccagcttcacaaaagaggaaatgcaggcgggtaaacaccaagaatatgaacagaagcta
cttcaagaattatataaattaaaccccaattttcttcaactgtctacgggttcagttgat
aagaataagaacaaagtgacaccactgcagaggtatgatacccccattgacaaaccttcc
gattctctcagcatagggaatggtgataattcccagcagatatctaacagtgatacacct
tcaccaccacctggtttatcaaaatccaatccagtcatcactatcagttcatccaatcac
agtgcacggtctccttttgaaggggcagtaactgagtcacagtcgttattctcagacaat
ttccgccatcccaaccctatcccaagtgggcttcctcctttccccagttccccacagaca
tccagtgactggcctacagcaccagaaccacagagcctcttcacatcagaaacaatccca
gtatcgtcttctacagactggcaagcagcatttggctttggttcttctaaacaaccagag
gatgacttgggttttgatccctttgatgtcactcgaaaagccttagcagacctgattgaa
aaggaactgtcagtccaagaccaaccttccctttcgcccacatctcttcagaactcctct
tcacacactacaaccgccaaaggtccgggctctggattcctacatcctgctgcacctaca
aatgccaactcgagtctcaatagtaccttttcagtcttgccacagaggttccctcaattt
cagcagcaccgagcggtttataattcattcagttttccaggccaggcagcccgctatcct
tggatggcctttccacgcaatagcatcatgcacttgaaccacacagcaaatcccacctca
aatagtaatttcttggacttgaatctcccgccacagcacaacacaggtctgggagggatc
cctatagcagacaacagcagttctgtagagagtttaaatatgaaggaatggcaggacggg
ctaagggcacttctacccaacattaacatcaactttggtggactgcccaattcttcttcc
ccctccaacgccagccacagtgcaccaacgtccaacactgccaccaccgacagcccgagt
tgggacagccctggcagctggacagacccagccatcatcacaggtattccagcatcttca
ggaaacagtttagactctcttcaagatgacaatcctccacactggctcaaatcccttcag
gccctcacagagatggacggccccactgctgctccatcacaagcccaccacagcgccccc
ttcagcacacagatccctttgcacagagccagttggaatccctaccctcctccttcaaat
ccttccagctttcactcgccacccccaggctttcagacagccttcagaccccccagcaaa
acccccacagatttgttacagagttcaacactggaccgccattag
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