Burkholderia mallei SAVP1: BMASAVP1_A1044
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Entry
BMASAVP1_A1044 CDS
T00457
Symbol
dnaE1
Name
(GenBank) DNA polymerase III, alpha subunit, form 1
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
bmv
Burkholderia mallei SAVP1
Pathway
bmv03030
DNA replication
bmv03430
Mismatch repair
bmv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bmv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BMASAVP1_A1044 (dnaE1)
03430 Mismatch repair
BMASAVP1_A1044 (dnaE1)
03440 Homologous recombination
BMASAVP1_A1044 (dnaE1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bmv03032
]
BMASAVP1_A1044 (dnaE1)
03400 DNA repair and recombination proteins [BR:
bmv03400
]
BMASAVP1_A1044 (dnaE1)
Enzymes [BR:
bmv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BMASAVP1_A1044 (dnaE1)
DNA replication proteins [BR:
bmv03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BMASAVP1_A1044 (dnaE1)
DNA repair and recombination proteins [BR:
bmv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BMASAVP1_A1044 (dnaE1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
RecG_wedge
Motif
Other DBs
NCBI-ProteinID:
ABM51561
LinkDB
All DBs
Position
I:1023751..1028811
Genome browser
AA seq
1686 aa
AA seq
DB search
MGGAGSHGARRFGARLRAPARRAGIARMARGAALAGHVERRLLRIGRHDRAAREARDVGC
RRELRVERGTVIEHEAVAVVMGTADFLEILEDPALELIDVLDADVLHVDRRLLAADAARA
ERHDRLALEVRAVRLDHGGKLAEFVDPVIERAIERPHVDFERIARVEHHDGAARVVVPLV
EPRFERARVDGRRAAELRLDRRLLHRDDLALQAHEHPAKRLRIGQALLERQVRELALEER
IVADVIDERVGRLAWARDEQIDAFGREQDRAAQPERVAARGDERPPLLDRIERDETVGGE
IDGGHEVRTVRRLRPGGEAARLGGGARGERLGASGRKREKRGKAVLSRKPRGFFAVGRTA
DVFGARRGAVASAPARRRVAAGPGAGESRAARLRRRGRRRVERRAHRRVVRRVADAFAAA
GHAIPKRGETRARSTDADVAASPRTGRRRPEPVIEPDDPNPRSEPATRAAANCRRARLRG
PPPAPALARRPTRRFFARSERYRVPGPATIAPMSDPRFVHLRVHSEFSIADGIVRLDDIV
KSAAEDGQGALALTDLGNAFGLVRFYKEARDAGIKPIAGCDVWITNHDDRDKPSRLLLLV
KDKRGYLNLCELLSKAWLTNQYRGRAELDASWLEGELAEGLLALSGAQQGDIGLALAAGN
EAAARRHAQRWARVFPGGFYIELQRYGQPGAEAYIQQAVTIAAELKLPVVATHPLQYMTA
DDFTAHEARVCISEGDILANPRRQKRFTTEQFFRTQGDMAALFADLPSALANTVEIAKRC
NLTLELGKPKLPRFPTPDGMSLDDYLVQLSQEGLDKRLVQLYPDEAEREAQRGKYNQRLD
FECGTIKKMGFPGYFLIVADFINWAKNNGVPVGPGRGSGAGSLVAYSLGITDLDPLRYNL
LFERFLNPERVSMPDFDIDFCQHGRDRVIQYVKEKYGADAVSQIATFGTMAAKAAVRDIG
RVLDLGYMFTDGVAKLIPFKPGKHVTIADAMKEEPLLQERYDNEDEVHQLLDLAQRVEGL
TRNVGMHAGGVLIAPGKLTDFCPLYTQGDEGGVVSQYDKDDVEAVGLVKFDFLGLTTLTI
LDWAERYIRRLDPSKENWSLAQVPLDDPTSFQILKKANTVAVFQLESRGMQGMLKDAQPD
RFEDIIALVSLYRPGPMDLIPSFCARKHGREKVDYPDPRVEPVLKETYGIMVYQEQVMQM
AQIIGGYSLGGADLLRRAMGKKKPEEMAKHREIFAEGAAKNGLTREKSDEIFDLMEKFAG
YGFNKSHAAAYALLAYYTAWLKAHHPAEFMAANMTLAMDDTDKVKILFDDCLVNGLAVLP
PDINRSNDRFEPVAEADGKRSRTIRYGLGAIKGSGQNAIEEILRAREEKPFADLFDFCER
IDRRVVNRRTIEAMIRAGAFDSLHENRAQLLASVPLAMEAAEQAAANALQAGLFDIGGVP
AHQHALVDEPAWDDKRRLQEEKGALGFYLSGHLFDAYRDEVRRFVRQKLGELKEGRDKVV
AGVIASLRTQMTQRGKMVIALLDDGTGQCEVTVFNEQFDANRALFKEDELLIVQGQARND
AFTGGIRFTAESVMDLERARSRYAQAVRMTMNGNADAAALRRVLEAHVAKPDETPPAAAP
APRGGRDGGRRAQAAIPNGLAVRIAYSNARAQGEMRLGDAWRVKPSDALLADLRAAFGGS
VVEIVY
NT seq
5061 nt
NT seq
+upstream
nt +downstream
nt
atgggcggcgcgggctcacacggcgcgcgccggttcggcgcccggctccgcgcgccggcc
cggcgtgccggaatcgcccggatggcacgcggggcagcacttgccgggcacgtagagcgg
cgactgttgcgcatcggccggcacgaccgcgcggcacgcgaagcacgtgacgtcggctgt
cggcgcgagctgcgggttgagcgcggtacggtaatcgaacacgaagcagtcgccgtggta
atgggcaccgccgacttcctcgaaatacttgaggatcccgccctcgagctgatagacgtt
ctcgatgccgacgtccttcatgtggatcgccgccttctcgcagcggatgccgcccgtgca
gaacgacacgatcgtcttgccctcgaggtccgcgcggttcgcctcgatcacggcgggaaa
ctcgctgaatttgtcgatccggtaatcgagcgcgcgatcgaacgtccccacgtcgacttc
gaacgcattgcgcgtgtcgagcatcacgacggggcggcccgcgtcgtcgtgcccctggtc
gagccacgctttgagcgtgcgcgcgtcgacggacggcgcgcggccgagctccggcttgat
cgccggcttcttcatcgtgatgatctcgcgcttcaggcgcacgagcatccggcgaaacgg
ctgcgaatcggacaggctctccttgaacggcaggtccgcgaacttgccctcgaagagcgg
atcgtggcggatgtaatcgacgaacgcgtcggtcgcctcgcgtgggcccgcgatgaacag
attgatgccttcgggcgcgagcaggatcgtgccgcgcagcccgagcgtgttgcagcgcgc
ggcgacgagcggccgccattgctcgatcgaatcgagcgagacgaaacggtaggcggcgag
attgacggtggtcatgaggttcggacggtaaggcggctgcggcccggcggcgaagccgcg
cggctcgggggcggcgcgcgcggcgagcgcctgggcgcaagcggacgaaaacgggaaaaa
cgtggaaaagccgtattatcccgcaaaccgcgcggctttttcgcagtcggccgaacggcc
gacgtgttcggcgcgcgccgcggcgccgtcgcaagcgcgccggcgcgccggcgtgtcgcg
gccgggcccggagccggggagtctcgcgccgcgcggttgcgaaggcgcggtcgtcggcgt
gtcgaacggcgagcccaccgacgtgtcgttcgccgcgtggccgatgcgttcgcggccgcc
ggccacgccatcccgaaaaggggcgaaacgagggcgcgaagcacggacgcggacgttgcc
gcgtcgccgcgaacggggcgccggcggccggaacccgtgatcgaacccgacgatccgaat
ccgcgatcggagccggccacgcgcgccgcggcgaactgccgtcgtgcgcggcttcgcggc
ccgccgcccgcgccggccttggcccgacggccaacgcggcgattttttgcccgcagcgaa
cggtatcgggttcccgggccggctacaatagcgcccatgtcagatccccgtttcgttcac
ctccgcgtccactccgaattctcgattgccgacggcatcgtgcgtctcgacgatatcgtc
aagtcggcggccgaagacggtcagggcgcgcttgcactgaccgacctcggcaacgcgttc
ggtctcgtccgtttctacaaggaagcccgcgatgcgggcatcaagccgatcgccggctgc
gatgtctggatcaccaaccacgacgatcgcgacaagccgtcgcggctgctgctgctcgtc
aaggacaagcgcggctacctgaacctctgcgagctgctgtcgaaggcgtggctcacgaac
caataccgcggccgcgcggagctcgacgcgagctggctcgaaggcgagctcgccgaaggg
ctgctcgcgctgtcaggcgcgcagcagggcgacatcggcctcgcgctcgcggcgggcaac
gaggcggccgcgcgccgccacgcgcagcgctgggcgcgggtgttcccgggcggtttctat
atcgaattgcagcgctacggccagccgggcgcggaagcgtacatccagcaggcggtgacg
atcgcggcggagctgaagctgcccgtcgtcgcgacacatccgctgcagtacatgacggcc
gacgatttcaccgcgcacgaggcgcgcgtgtgcatctcggaaggcgacatcctcgcgaat
ccgcgccgccagaaacgcttcacgaccgagcagttcttccgcacgcagggcgacatggcc
gcgctgttcgccgatctgccctcggcgctcgcgaacacggtcgagatcgccaagcgctgc
aacctgacgctcgagctcggcaagccgaagctgccgcggttcccgacgcccgacggcatg
tcgctcgacgactacctcgtgcagttgtcgcaggaagggctcgacaaacgcctcgtgcag
ctctacccggacgaggccgagcgcgaagcgcaacgcgggaagtacaaccagcgtctcgat
ttcgagtgcggcacgatcaagaagatgggctttccgggctacttcctgatcgtcgcggac
ttcatcaactgggcgaagaacaacggcgtgccggtgggccccgggcggggctcgggcgcg
ggctcgctcgtcgcgtattcgctcggcatcaccgacctcgatccgctgcgctacaacctg
ctgttcgagcgcttcctgaacccggagcgggtgtcgatgcccgacttcgacatcgacttc
tgccagcacggccgcgaccgcgtgatccagtacgtgaaggagaagtacggcgcggacgcg
gtgtcgcagatcgccaccttcggcacgatggccgcgaaggcggccgtgcgggatatcggc
cgggtgctcgatctcggctacatgttcaccgacggcgtcgcgaagctgatcccgttcaag
ccgggcaagcacgtgacgatcgccgacgcgatgaaggaagagccgctcctgcaggagcgc
tacgacaacgaggacgaagtccatcagttgctcgatctcgcgcagcgcgtggagggcctc
acgcgcaacgtcgggatgcacgcgggcggcgtgctgatcgcgcccggcaagctgaccgat
ttctgccccctctacacgcagggcgacgaaggcggcgtcgtcagccagtacgacaaggac
gacgtcgaagccgtcggcctcgtgaagttcgactttctcggcctcacgacgctcacgatt
ctcgactgggccgagcgctacattcgccgtctcgatccgagcaaggagaactggtcgctc
gcgcaggtgccgctcgacgatccgacgtcgttccagatcctcaagaaggccaacacggtc
gccgtgttccagctggaaagccgcggcatgcaggggatgctgaaggacgcgcagcccgac
cgcttcgaggacatcatcgcgctcgtgtcgttgtaccggccgggcccgatggacctgatt
ccgagcttctgcgcgcgcaagcacgggcgcgagaaggtcgactatccggatccgcgcgtc
gagcctgtcctgaaagagacctacgggatcatggtctatcaggagcaggtgatgcagatg
gcgcagatcatcggcggctattcgctcggcggcgcggacttgctgcgtcgcgcgatgggc
aagaagaagcccgaggagatggccaagcatcgcgagatcttcgccgagggcgccgcgaag
aacggcctcacgcgcgagaagtccgacgagatcttcgacctgatggagaagttcgcgggc
tacggcttcaacaagtcgcacgcggccgcgtacgcgctgctcgcgtattacaccgcgtgg
ctgaaggcgcaccatccggccgaattcatggcggccaacatgacgctcgcgatggacgac
accgacaaggtgaagatcctgttcgacgattgcctcgtcaacggcctcgccgtgctgccg
cccgacatcaaccgttcgaacgatcgcttcgagcccgtcgccgaggccgacggcaaacgc
tcgcgcacgatccgctacggcctcggcgcgatcaagggcagcggccagaacgcgatcgag
gagatcctgcgcgcacgcgaggaaaagccgttcgccgatctgttcgatttttgcgagcgg
atcgaccgccgcgtcgtgaaccgccgcacgatcgaagcgatgattcgcgcgggcgcattc
gattcgctgcacgagaatcgcgcgcagttgctcgcatcggtgccgctcgcgatggaggcc
gccgagcaggcggccgcgaacgcgctgcaggcgggcctgttcgacatcggcggcgtgccc
gcgcaccagcatgcgctcgtcgacgagccggcgtgggacgacaagcgtcgcctgcaggaa
gagaagggcgcgctcggcttctacctgtccggccacctgttcgacgcgtatcgcgacgag
gtgcgccgtttcgtgcgccagaagctcggcgagctgaaggaagggcgcgacaaggtggtg
gccggcgtgatcgcgtcgttgcgcacgcagatgacgcagcgcggcaagatggtgatcgcg
ttgctcgacgacggcaccggccagtgcgaagtcaccgtgttcaacgagcagttcgacgcg
aaccgcgcgctcttcaaggaggacgagctgctgatcgtccaggggcaggcgcgcaacgac
gcgttcacgggcggaattcgcttcaccgccgagtcggtgatggacctcgagcgtgcgcgc
agccgctacgcgcaggcggtgcggatgacgatgaacggcaacgcggacgcggcggcgctg
cgccgcgtgctggaagcgcacgtcgcgaaacccgacgagacgccgcccgccgcggcgccg
gcgccgcgcggcggtcgcgacggcgggcggcgggcgcaggcggcgataccgaatggtctc
gccgtgcggatcgcatacagcaacgcgcgtgcgcaaggcgagatgcgcctgggcgacgca
tggcgcgtgaagccgagcgacgcgttgctcgccgatctgcgcgcggcgttcggcggcagc
gtcgtcgagatcgtctactga
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integrated database retrieval system
