KEGG   Brugia malayi (filaria): BM_BM5500
Entry
BM_BM5500         CDS       T01050                                 
Symbol
Bma-thoc-1
Name
(RefSeq) Uncharacterized protein
  KO
K12878  THO complex subunit 1
Organism
bmy  Brugia malayi (filaria)
Pathway
bmy03013  Nucleocytoplasmic transport
bmy03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:bmy00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    BM_BM5500 (Bma-thoc-1)
  09122 Translation
   03013 Nucleocytoplasmic transport
    BM_BM5500 (Bma-thoc-1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bmy03019]
    BM_BM5500 (Bma-thoc-1)
   03041 Spliceosome [BR:bmy03041]
    BM_BM5500 (Bma-thoc-1)
Messenger RNA biogenesis [BR:bmy03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     BM_BM5500 (Bma-thoc-1)
Spliceosome [BR:bmy03041]
 Complex C
  Other components
   EJC/TREX
    BM_BM5500 (Bma-thoc-1)
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    BM_BM5500 (Bma-thoc-1)
SSDB
Motif
Pfam: efThoc1 Death Terminase_2
Other DBs
NCBI-GeneID: 6103352
NCBI-ProteinID: XP_042934530
LinkDB
Position
Unknown
AA seq 634 aa
MEKAIFALKFEQIRAAYKKMKEEGSAAEVIRLTIENAIHRKAFEIAQCTDIEQESLLRQL
LAVTFQAAKEDFCAKGTTVAVIQDVFDVSPVKHCEKLFAIVEDNLPQWKMGIFYEPCKNM
ILRMCNDLLKRLSRTVDTSFCGRILVLLAHALPLCEKSGLNLVSHFNLGNITKYDLADSC
FAVDANLTEDSDVMEVGEISEREIPVDYTLYAKFWQLQSFFSSPATCFEKSKWRTFQQNT
TEVLNIFSSHKLEFSATLEEGSKRERSKQENSNDDIAAIPSTSRADGDEDIYFAKYLTSQ
KLLQLQLNDSQFRRYFLVQCLILYQYLVSDIKFKDKSFTLNDEQLRFIIESTERCFRLLR
ETYPKGPHFADAMKVILHREKEWSEWKNKGCLDYTQLADKEKPSVFKKRPRNRYDPSKLD
LGNPELTKLWNINPDMLSACEDSRRNFIPKSVNNESFQWRASRLLMSQSTSYFQTPSKRS
EVTTNLAPFLEEVIKHTAANFPELKDRIPGITDNKRNIKGNVNSNNSSTSSALRNGREHI
EPSAALTDSHIEQLAPLLASNWSTLADVMNINKERNDAKEEPMKVAQRILTAWRQKEGKA
ATVKRISSVLLMAELFSEQVGQVFRGNTPKRISA
NT seq 1905 nt   +upstreamnt  +downstreamnt
atggagaaagcaatctttgcattaaaatttgaacagatcagagcggcttacaagaaaatg
aaagaggaagggagtgctgccgaagtaattcggttgacaattgagaatgccatacaccgg
aaagcatttgagattgcacagtgtacggatattgagcaagaaagtcttctgaggcagtta
ctagctgttacattccaagctgctaaagaagatttttgtgcaaaaggaacaacagttgct
gtgatacaagatgtattcgatgttagcccagttaaacattgcgaaaaactcttcgctatt
gttgaagacaatttgccacaatggaaaatgggtattttttacgagccttgcaaaaatatg
atattgaggatgtgtaatgatttgctgaagcgcctttcacgaacggtggatacaagcttt
tgtggccggattttagtcttattagcacatgcgctaccactgtgtgagaaatccggctta
aatcttgttagccattttaatctgggcaatatcacgaaatatgacttggcagattcttgc
tttgctgttgatgcgaatttaacggaggacagcgacgttatggaagtcggtgaaataagt
gaacgggaaattccagtggattatacactttatgcgaaattttggcagttacaatctttc
ttctcttcaccagcaacatgttttgaaaaatctaaatggaggacttttcagcagaacaca
actgaggtgctcaacatattttcaagtcataaactggaattctctgcaacccttgaagaa
ggttcgaaaagagaacgctcgaagcaggaaaattcaaatgatgatattgctgcaatccca
tctacttcgagagctgatggagatgaagacatttattttgcgaaatatttaactagtcag
aagctattgcaattacagttaaatgattctcaatttcgacgttactttcttgtgcagtgc
ctaattctataccaatatttagtatccgatatcaaattcaaggacaaatcttttactctg
aatgatgaacagttacgatttattattgaatccactgagagatgttttcgattacttcgt
gagacgtatccaaaaggacctcattttgctgatgctatgaaagtaattcttcatcgtgag
aaggaatggtctgaatggaagaacaaaggttgcctggattatactcaattggcagacaaa
gaaaaacctagcgtttttaaaaagcggcctagaaacagatatgacccctcaaaacttgat
ctcggcaatccagaactgacgaagttatggaatatcaatccagatatgttgtcggcttgt
gaagactcaagaagaaattttataccgaaatcagtgaacaatgaatcattccagtggaga
gcatcacggctgctgatgtctcagagcacgtcatattttcaaacaccatcgaagaggagt
gaagtaacaacgaatttagcaccatttttggaagaagtgatcaagcatactgcagctaat
tttccggaattgaaagatcgcattccgggtattacagataacaaaagaaatatcaaagga
aatgtgaatagtaataacagttctacttcatcagctcttcgtaatgggcgggagcatatt
gaaccatctgctgctttaactgactcacacatcgaacagctggcaccgttacttgcaagc
aattggtcgacgttagcagatgtaatgaatatcaataaagaaaggaacgacgcaaaagaa
gagccaatgaaagtggcacaaagaatactaacagcctggaggcagaaggagggaaaagca
gcaacggttaaacggattagtagtgttttattgatggctgaattattcagtgaacaagtt
ggacaagtttttagagggaatacaccgaaaaggatttcagcatga

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