Brugia malayi (filaria): BM_BM5500
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Entry
BM_BM5500 CDS
T01050
Symbol
Bma-thoc-1
Name
(RefSeq) Uncharacterized protein
KO
K12878
THO complex subunit 1
Organism
bmy
Brugia malayi (filaria)
Pathway
bmy03013
Nucleocytoplasmic transport
bmy03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bmy00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
BM_BM5500 (Bma-thoc-1)
09122 Translation
03013 Nucleocytoplasmic transport
BM_BM5500 (Bma-thoc-1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bmy03019
]
BM_BM5500 (Bma-thoc-1)
03041 Spliceosome [BR:
bmy03041
]
BM_BM5500 (Bma-thoc-1)
Messenger RNA biogenesis [BR:
bmy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
BM_BM5500 (Bma-thoc-1)
Spliceosome [BR:
bmy03041
]
Complex C
Other components
EJC/TREX
BM_BM5500 (Bma-thoc-1)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
BM_BM5500 (Bma-thoc-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
efThoc1
Death
Terminase_2
Motif
Other DBs
NCBI-GeneID:
6103352
NCBI-ProteinID:
XP_042934530
LinkDB
All DBs
Position
Unknown
AA seq
634 aa
AA seq
DB search
MEKAIFALKFEQIRAAYKKMKEEGSAAEVIRLTIENAIHRKAFEIAQCTDIEQESLLRQL
LAVTFQAAKEDFCAKGTTVAVIQDVFDVSPVKHCEKLFAIVEDNLPQWKMGIFYEPCKNM
ILRMCNDLLKRLSRTVDTSFCGRILVLLAHALPLCEKSGLNLVSHFNLGNITKYDLADSC
FAVDANLTEDSDVMEVGEISEREIPVDYTLYAKFWQLQSFFSSPATCFEKSKWRTFQQNT
TEVLNIFSSHKLEFSATLEEGSKRERSKQENSNDDIAAIPSTSRADGDEDIYFAKYLTSQ
KLLQLQLNDSQFRRYFLVQCLILYQYLVSDIKFKDKSFTLNDEQLRFIIESTERCFRLLR
ETYPKGPHFADAMKVILHREKEWSEWKNKGCLDYTQLADKEKPSVFKKRPRNRYDPSKLD
LGNPELTKLWNINPDMLSACEDSRRNFIPKSVNNESFQWRASRLLMSQSTSYFQTPSKRS
EVTTNLAPFLEEVIKHTAANFPELKDRIPGITDNKRNIKGNVNSNNSSTSSALRNGREHI
EPSAALTDSHIEQLAPLLASNWSTLADVMNINKERNDAKEEPMKVAQRILTAWRQKEGKA
ATVKRISSVLLMAELFSEQVGQVFRGNTPKRISA
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atggagaaagcaatctttgcattaaaatttgaacagatcagagcggcttacaagaaaatg
aaagaggaagggagtgctgccgaagtaattcggttgacaattgagaatgccatacaccgg
aaagcatttgagattgcacagtgtacggatattgagcaagaaagtcttctgaggcagtta
ctagctgttacattccaagctgctaaagaagatttttgtgcaaaaggaacaacagttgct
gtgatacaagatgtattcgatgttagcccagttaaacattgcgaaaaactcttcgctatt
gttgaagacaatttgccacaatggaaaatgggtattttttacgagccttgcaaaaatatg
atattgaggatgtgtaatgatttgctgaagcgcctttcacgaacggtggatacaagcttt
tgtggccggattttagtcttattagcacatgcgctaccactgtgtgagaaatccggctta
aatcttgttagccattttaatctgggcaatatcacgaaatatgacttggcagattcttgc
tttgctgttgatgcgaatttaacggaggacagcgacgttatggaagtcggtgaaataagt
gaacgggaaattccagtggattatacactttatgcgaaattttggcagttacaatctttc
ttctcttcaccagcaacatgttttgaaaaatctaaatggaggacttttcagcagaacaca
actgaggtgctcaacatattttcaagtcataaactggaattctctgcaacccttgaagaa
ggttcgaaaagagaacgctcgaagcaggaaaattcaaatgatgatattgctgcaatccca
tctacttcgagagctgatggagatgaagacatttattttgcgaaatatttaactagtcag
aagctattgcaattacagttaaatgattctcaatttcgacgttactttcttgtgcagtgc
ctaattctataccaatatttagtatccgatatcaaattcaaggacaaatcttttactctg
aatgatgaacagttacgatttattattgaatccactgagagatgttttcgattacttcgt
gagacgtatccaaaaggacctcattttgctgatgctatgaaagtaattcttcatcgtgag
aaggaatggtctgaatggaagaacaaaggttgcctggattatactcaattggcagacaaa
gaaaaacctagcgtttttaaaaagcggcctagaaacagatatgacccctcaaaacttgat
ctcggcaatccagaactgacgaagttatggaatatcaatccagatatgttgtcggcttgt
gaagactcaagaagaaattttataccgaaatcagtgaacaatgaatcattccagtggaga
gcatcacggctgctgatgtctcagagcacgtcatattttcaaacaccatcgaagaggagt
gaagtaacaacgaatttagcaccatttttggaagaagtgatcaagcatactgcagctaat
tttccggaattgaaagatcgcattccgggtattacagataacaaaagaaatatcaaagga
aatgtgaatagtaataacagttctacttcatcagctcttcgtaatgggcgggagcatatt
gaaccatctgctgctttaactgactcacacatcgaacagctggcaccgttacttgcaagc
aattggtcgacgttagcagatgtaatgaatatcaataaagaaaggaacgacgcaaaagaa
gagccaatgaaagtggcacaaagaatactaacagcctggaggcagaaggagggaaaagca
gcaacggttaaacggattagtagtgttttattgatggctgaattattcagtgaacaagtt
ggacaagtttttagagggaatacaccgaaaaggatttcagcatga
DBGET
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