Brassica napus (rape): 106346596
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Entry
106346596 CDS
T04128
Name
(RefSeq) putative ABC transporter B family member 8
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
bna
Brassica napus (rape)
Pathway
bna02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
106346596
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bna02000
]
106346596
04147 Exosome [BR:
bna04147
]
106346596
04090 CD molecules [BR:
bna04090
]
106346596
Enzymes [BR:
bna01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
106346596
Transporters [BR:
bna02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
106346596
Exosome [BR:
bna04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
106346596
CD molecules [BR:
bna04090
]
Proteins
106346596
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
AAA_16
SMC_N
Zeta_toxin
AAA_22
AAA_29
AAA_21
AAA_15
AAA
AAA_18
RsgA_GTPase
PRK
AAA_30
AAA_28
ABC_ATPase
nSTAND3
Motif
Other DBs
NCBI-GeneID:
106346596
NCBI-ProteinID:
XP_048591262
LinkDB
All DBs
Position
A6:complement(23955182..23963018)
Genome browser
AA seq
1241 aa
AA seq
DB search
MASREKTESVSSKSSCNIHVIFRFADWIDIVLMVLGMVGAIGDGMSTNVALVFASKIMNS
LGYGQHNHHTFKDEVQKCSLYFVYLGLAILGVAFMEGYCWSKTSERQVEKIRRTYLKAVL
RQEVSFFESEDASISEIIHTISTDTSLIQQLLSEKVPIFLMHTSVFITGLVFAAYFSWRL
TLVALPSLVLLLIPGLIYGKYLVYLSNKSYNEYAKANSIVEQALSSIKTILSFTAETQII
KSYSEILERHKKLGLKQGLAKGLAVGSTGISFTIWAFLAWYGSRLVMHKQETGGRIYAAG
ISFILSGLSLGTALTEIRYFSEASVAAARICRRIDRVPEIDGEDTTKGIIPNAKIEGRVE
FEHVTFTYPSRPKSIILKDFTLRADAGRTVALMGASGSGKSTVIALLQRFYDPAEGFVRI
DGFDIKTLQLKWMREQIGVVSQDHALFGTSIKENIMFGKDNASMDEVVSAAKAANADEFI
TQLPDGYETQIGDRGGLLSGGQKQRIAIARAIIRNPVILLLDEATSALDAESETLIQVSL
DQVAAGRTTLVVAHKLSTVRGADLIAVLENGSVKEMGSHEDLMTKNNHYAKLINIQRQFS
SQEHRQDLQDGSKTPEGRQYWSARNSFSRLSIRSTPDLIASPIPFESIHAAEPDDNLPST
SFTRLLPLVSPEWKSSLLGCISAATFGAIQPIYALNIGGMISAFFATSSKQMQDRIRIYS
LIFISLTFISMTLNLIQHYSFAKMGERLMQRLRLRMLEKIFTFEPAWFDVEENSSGELCS
RLSNEASTVKSIVSDRISLLVQTISGVLIAMVIGLLVAWKLALVMIAVQPLSVLCFYTKK
VLLTSISRNYAYAQNRSSNIASEAVYNHKIVTSLGSTKKIIEIFDKAQDEARRKGKKAAW
LAGFGMGSAQCLTFMTWALDFWYGGVLVEKGEISAGDVFKTFFVLVSTGKVIAEAGSMTS
DLAKGSAAISSVFKILDRPSAQDNTNHGAKTEAIIGRIELKKVDFSYPNRPSIPVLQQFS
LDIKPGTSIGLVGTSGCGKSTVIALIQRFYDVEKGCVKIDGVDLREIDIKWYRKHTALVS
QEPVVYSGSIRENILLGRPEAAEDEVMEAAKAANAHDFISAMEDGYETECGERGVQLSGG
QKQRLAIARAFLRNPVILLLDEVTSSLDSDSEQAVQEALARIMASRKMTTVVVAHRLNTL
KKLDRIAVIADGTVVETGSYDRLKNMGGQFSRLLHAHDLKS
NT seq
3726 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctcgagagaaaaccgagtcagtttcatctaaatcgagttgtaacatacatgta
atatttcggttcgcagattggatagatatagttctgatggtacttggtatggtgggagcc
attggagatggcatgtccacgaatgtggcgttagtgttcgcaagcaagatcatgaatagc
ttgggctacggtcaacacaatcatcatactttcaaggacgaggttcagaagtgcagctta
tactttgtgtacttgggactggctatcctgggagtggcatttatggaggggtattgttgg
agcaaaacaagcgagagacaagttgagaagattcgtcgaacatatcttaaagctgttctc
cgacaagaagtttctttctttgaatcagaagatgcttccatttctgaaattattcacacg
atttccactgacacttctctcatccaacaacttcttagtgaaaaggtgcccatattcttg
atgcacacatcagttttcattacaggcctcgtgtttgcggcatacttctcatggagatta
accctagtagccctcccatcacttgttcttcttctaatcccagggttgatctatggcaaa
taccttgtttatttatctaacaaatcctacaatgaatacgccaaagcaaactcaatcgtg
gaacaagctctaagctccatcaagactattctatcattcacggctgagactcaaatcatc
aagagctactcagagatcttggaaagacacaaaaagcttgggctaaagcaaggtctggcc
aaaggtttagccgtgggaagcacagggatctctttcaccatatgggcttttctggcgtgg
tacggaagcaggttggtgatgcacaaacaagaaaccggtggacgcatttacgcagctggt
atctctttcatcttgagtggcctttctctagggacggcacttactgagatcagatatttc
tctgaggcttcagttgcagcagctagaatatgtagaaggattgatagagttccagagata
gacggtgaggatacaacgaaaggtatcataccaaatgcaaagatcgagggaagagtagag
tttgagcatgtaacctttacatatccttctcgtccaaaatccataatactcaaggacttc
actctcagagcagatgctggaagaaccgtagctctgatgggagctagtggaagtggtaag
tctacagtgatcgcattgctgcaacgtttctatgatccagcagaagggtttgtgaggata
gatgggtttgacataaagactcttcagttaaaatggatgagagaacaaattggtgttgtg
agtcaagaccatgctttgtttgggacctccatcaaggaaaatattatgtttgggaaagat
aatgcatcgatggatgaagtcgtttcagctgcgaaggctgcaaatgcggatgaatttatt
acacaactcccagatggttatgagacacagataggtgatcgtgggggacttttatcagga
ggtcagaagcaacggattgcaattgcacgtgcgatcattagaaatccagtgattttactt
ttagatgaagcaacaagtgcactagatgcagaatctgaaacactgattcaagtttcactt
gatcaagtagccgcgggacgaaccacgctggtggtggcccataagctttcaacagttaga
ggagcggatctcattgctgtgctagaaaacggttccgttaaagaaatgggttctcacgaa
gatttgatgaccaagaacaaccattatgcaaaactcataaacattcaaagacaattcagc
agccaagaacatcgacaagatcttcaagatgggtccaaaactcctgagggaagacaatac
tggtcagccaggaacagtttcagtaggctaagcataaggtctacacctgatctcattgct
tctcctatccctttcgagagcattcacgcagcagaacctgatgataacctcccttccact
tctttcactagacttcttccactggtctccccagagtggaagtcttctctcctcggctgc
atctcagctgcaacatttggtgcaatccaacccatttacgccttaaacatcggcggtatg
atctctgcttttttcgccacaagctcaaagcaaatgcaggataggatccggatttactcc
ttaatctttatctccctcacttttatctccatgacccttaacctcattcagcattacagc
tttgccaagatgggtgaaaggctgatgcaaaggcttcggttgagaatgcttgaaaaaatt
ttcacctttgaaccggcctggtttgatgtggaagagaactctagcggtgagctttgttca
aggcttagtaacgaagcatccactgtgaagtccatagtatcagacagaatctccttgctc
gtccagaccatttcaggtgtcctaatagccatggtgatcggtctactagttgcatggaaa
ctcgcgttggtcatgatagctgtccagcctctctccgtcctttgcttctacacaaagaaa
gttttgctcaccagcatttcccgtaactacgcctatgcgcaaaaccgtagctcaaacatt
gcatcagaagctgtttacaaccacaagattgttacatctttagggtcaacgaaaaagatc
atagaaatatttgataaggctcaagatgaagcgagaagaaagggtaagaaggcagcatgg
ctcgcagggtttgggatgggatcggctcagtgcctaaccttcatgacatgggcgttagac
ttttggtatggaggagtgttggttgaaaagggagagatctctgccggggatgttttcaag
acattctttgttttggttagtaccggtaaggttattgcggaagcaggaagcatgacttcg
gaccttgccaagggctcagccgccatatcttcagtcttcaaaatacttgaccgtccttca
gctcaagacaatacaaaccatggagcaaagactgaggcaataatcgggagaatagagcta
aagaaggttgatttctcttatccaaaccggcctagtattccagtgctccaacagttttcc
ttagacatcaagcctgggactagcattggattggtcggtacatcagggtgcgggaaatca
acagtgattgctttgatccaacgcttctatgacgtggaaaagggatgtgtgaaaatagac
ggtgtagatttgagagaaatagatataaaatggtataggaaacatactgcactagtgagc
caagagccagttgtttattccggaagtatccgagagaatattttgcttggacggcccgaa
gcggctgaggatgaggttatggaggctgctaaagccgccaatgcacatgatttcatctcg
gcaatggaggatggatatgaaacggagtgtggagaaagaggagtgcaactttcaggtggt
caaaagcagaggctagctatcgctagagcttttcttagaaacccagtgatacttctactt
gacgaggttacgagttccctagactctgactcagagcaggctgttcaggaggctctggct
aggatcatggctagccggaagatgacaactgtagttgtggctcaccgcctcaacaccctg
aagaaactggaccgcattgcggtaatagcagatggaaccgtagtggagacagggagctac
gaccgcttgaagaacatgggaggccagttctctagacttcttcatgctcatgatctcaaa
tcttga
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