Brassica napus (rape): 106347055
Help
Entry
106347055 CDS
T04128
Name
(RefSeq) ubiquitin domain-containing protein DSK2b
KO
K04523
ubiquilin
Organism
bna
Brassica napus (rape)
Pathway
bna04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
106347055
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bna04131
]
106347055
03051 Proteasome [BR:
bna03051
]
106347055
Membrane trafficking [BR:
bna04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
106347055
Proteasome [BR:
bna03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
106347055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
UBA
Rad60-SLD
STI1-HOP_DP
TBK1_ULD
CUE
Mod_r
Dsc3_N
Ubiquitin_5
HOIP-UBA
Rad60-SLD_2
UN_NPL4
Motif
Other DBs
NCBI-GeneID:
106347055
NCBI-ProteinID:
XP_013642001
LinkDB
All DBs
Position
C9:complement(8357220..8360556)
Genome browser
AA seq
546 aa
AA seq
DB search
MGGEGDSNKPLTAGDVGEGEGGALVAVNVRCSNGSKFSVSTSLDSTVEAFKELVAQNSDV
PANQQRLIYKGRILKDDQTLLSYGLQGDHTVHMVRGFAPSSAPPPPPPSATVTQDNTSNL
GESLFPGLGFNPLGGGSLFGAPPDLEQAQQQLAQNPNMVRDMMNSPAIQNLMNNPEFMRS
IIMSNPQMRDLVDRNPELGHVLNDPSILRQTLEAARNPELMREMMRNTDRAMSNIESMPE
GFNHLRRMYENVQEPLMNATTMSGNAGSNAASNPFAALLGNQGVTTTTTTTQGSDGSTNA
ETGTGNGIPNANPLPNPWGATAGQTNAPGRPNSGGDARSPGLGGLGGLGGLGGLGGLGMH
GADSPLGAIPDASQLNQMLQNPAMSQMMQSMLSNPQYVNQLINLNPQLRSMLDSHPQLRE
MMQNPDLLRQFSSPEMMQQMMSLQQLLSSQNRNTTSQEPGQTGAAAAGAGNNGGMDLLMN
LFGSLGAGGLSGTNQPSVPPEERFATQLQQLQEMGFYDRAENIRALLATNGNVNAAVERL
LGSIGQ
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgggtggagaaggagattcgaataagccgctgactgctggtgatgttggcgaaggagaa
ggaggagctctggtggccgtcaacgtcagatgctcgaacggatccaaattcagcgtgagc
acgagcctcgattcgacggtggaagccttcaaagagctggtggcgcagaacagcgacgtc
ccagcgaatcagcagcggttgatttacaaaggtcgcatcctcaaggacgatcagactctt
ctcagctacggtttgcagggtgatcacacggttcatatggtccgtggctttgcgccatct
tcagcaccaccaccaccgcctccttctgctactgttactcaagataatacgtcgaatctt
ggagaatctttgttccctgggcttggattcaaccctttgggcggtgggagcttattcgga
gcaccaccggatcttgagcaggctcagcagcagctagctcaaaaccctaacatggttaga
gacatgatgaactccccagccatccagaatcttatgaacaaccccgagttcatgaggagt
attatcatgagcaaccctcagatgcgtgaccttgttgaccgcaaccctgagcttggccac
gtgcttaacgacccgagcatcctcaggcagactttggaagctgcgaggaacccggagctg
atgcgtgagatgatgcggaataccgatagggcaatgagtaatattgagtctatgcctgag
gggtttaaccatctgaggcgtatgtatgagaatgttcaggagccgctcatgaatgctact
actatgtccgggaacgctgggagcaatgcggcttctaatccttttgctgctctccttggg
aaccagggggttactactactactactactacacaaggtagcgatggttctactaatgct
gaaacggggacaggaaatggtattccgaatgcaaacccacttcctaatccttggggtgct
acggctggccagacaaatgccccaggaaggccaaattctggtggggatgcgagaagccct
ggacttggtggtctaggtggtttaggaggacttggtggacttgggggccttggtatgcat
ggagcggattcacctcttggtgccattccagatgcttctcagttgaaccagatgttgcaa
aatccagccatgtcccagatgatgcaaagcatgctttccaatccacaatacgtgaaccag
cttatcaatctcaacccacagctccgaagtatgcttgattcgcatcctcaattgagggaa
atgatgcagaacccagatctcctccgtcaatttagctccccggagatgatgcagcaaatg
atgtctctacagcaattactttcctcccagaatagaaatacgaccagccaggaaccaggg
caaactggtgctgccgccgcaggagcaggaaataacggagggatggatttattgatgaat
ctgtttggcagtcttggtgctggtggccttagtggcacaaaccaacccagtgttcctcct
gaggaacgttttgcgactcaattgcagcagctacaagaaatgggattctatgacagagca
gagaacataagggctttgcttgcaaccaatggaaacgttaacgctgctgtagaacggctc
ttgggaagtattggccagtag
DBGET
integrated database retrieval system
