Brassica napus (rape): 106351539
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Entry
106351539 CDS
T04128
Name
(RefSeq) serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform-like
KO
K03456
serine/threonine-protein phosphatase 2A regulatory subunit A
Organism
bna
Brassica napus (rape)
Pathway
bna03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
106351539
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
bna01009
]
106351539
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bna03019
]
106351539
03036 Chromosome and associated proteins [BR:
bna03036
]
106351539
Protein phosphatases and associated proteins [BR:
bna01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
106351539
Messenger RNA biogenesis [BR:
bna03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
106351539
Chromosome and associated proteins [BR:
bna03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
106351539
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT
HEAT_2
Htt_N-HEAT_1
HEAT_EZ
Vac14_Fab1_bd
PDS5
SCD
Adaptin_N
Cnd1
TAF6_C
CLASP_N
CEP104-like_TOG
Motif
Other DBs
NCBI-GeneID:
106351539
NCBI-ProteinID:
XP_013646781
LinkDB
All DBs
Position
A9:29944998..29948417
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AA seq
588 aa
AA seq
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MAMVDEPLYPIALLIDELKNDDIQLRLNSIRRLSTISRALGEERTRKELIPFLSENSDDD
DEVLLAMAEELGVFILYVGGLEHAHVLLPPLESLCTVEETSVREKAVDSLCKIGSQMRES
DLVDSFVPLVKILAAGEWFAARVSACGLFHVAYQGCTDVLKTELRSSYSQLCKDDMPMVR
RAAASNLGKFATTVESSYLVGEIMTMFDDLTKDEQDSVRLLAVEGCAALGKLLEPQECVA
RILPVIVNFSQDKSWRVRYMVANQLYELCEAVGPDSTRTDLVPAYVGLLRDNEAEVRIAA
AGKVTKFCQLLNPELVVQHILPCVKELSTDSSQHVRSALASVIMGMAPILGKDSTIEHLL
PIFLSLLKDEFPDVRLNIISKLDQVNQVIGIDLLSQSLLPAIVELAEDRHWRVRLAIIEY
VPLLASQLGIGFFDDKLGALCMQWLQDKVYSIREAAANNLKRLAEEFGSEWAMQHIVPQV
LDMVTNPHYLHRMMVLRAISLMAPVMGSEITCSKFLPVVVEASKDRVPNVKFNVAKLLQS
LIPIVDQSVVEKTIRQCLVDLSEDPDVDVRYFANQALRSIDGAAVAQS
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atggccatggtggatgaacccttgtatcccatcgctttgctcattgacgagctcaagaac
gatgatatacagctccgcttgaactccatccgtcgcctttccacaatatctcgcgccctt
ggagaggagcgcacgaggaaagagttaatccccttcctgagtgagaacagtgacgatgac
gacgaggtgctccttgcaatggccgaggagctaggagtttttatcctttatgttggagga
ctcgagcacgcgcatgtgcttctccctcctcttgaatctctctgcaccgttgaagagacc
tccgtgagagagaaagctgtggactcgctttgcaagattggttctcagatgagggaaagt
gaccttgtcgactccttcgtccctcttgtgaagatacttgcagctggtgaatggtttgca
gcgagagtttccgcgtgtggtctgtttcatgttgcgtaccaaggttgtactgatgtgttg
aagacagagttaaggtctagttatagccagttgtgcaaagatgatatgcctatggtgcga
agagctgctgcttctaatctggggaagtttgctacaactgtggagtctagctatttggtt
ggtgagatcatgactatgttcgatgatcttactaaagatgagcaagattctgttagactg
ttggctgtggaaggctgcgcagctcttggaaagttgttggaaccccaggagtgtgttgca
cgcattttacctgttattgttaatttctctcaggataaatcttggagggtgcggtacatg
gttgctaatcagctgtatgaactttgtgaggcagtgggtcctgattccacaaggacggat
ttggttccagcatatgtgggactgctacgagacaacgaggctgaagtgcgaatagcagca
gcaggtaaagtgaccaagttctgccagcttttgaatccagagcttgtggttcagcacatc
cttccttgtgtcaaggaattatcaaccgattcatctcaacatgtccgctctgctcttgct
tctgtaataatggggatggctcctatccttggcaaagattcaaccattgagcatctgcta
ccaatttttctttcccttttgaaagatgaatttcctgatgtacggctcaacatcataagc
aagctagaccaagtcaaccaggttattgggatcgacctgctgtcacaatccttgttacca
gcgattgtagagcttgctgaggatcgtcactggagagttcggcttgctataattgaatac
gttcctctgttggctagccagttaggtatagggttctttgatgacaagcttggagccctt
tgcatgcaatggctgcaagacaaggtctactctatccgtgaagctgcagcaaacaaccta
aagcgccttgcagaggagttcggttctgaatgggcaatgcagcacatagttccacaggta
ctggacatggtaaccaatccgcactacctacataggatgatggttctacgagcaatatct
ctcatggctcctgtaatgggatctgaaattacatgctctaagtttcttcctgtggtggtt
gaggcatcaaaagacagagttccaaacgtcaagttcaatgttgcaaaacttctgcaatcc
ctcatccccatagtcgaccaatcagtggtggagaaaacaatacgtcagtgtttggtggac
ctgagcgaggaccctgatgttgatgttcgatattttgcaaaccaagcccttcgttccatt
gacggtgccgcagtggcacaatcctga
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