Brassica napus (rape): 106360365
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Entry
106360365 CDS
T04128
Name
(RefSeq) nuclear pore complex protein NUP214-like isoform X1
KO
K14317
nuclear pore complex protein Nup214
Organism
bna
Brassica napus (rape)
Pathway
bna03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
106360365
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bna03019
]
106360365
Messenger RNA biogenesis [BR:
bna03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
106360365
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
106360365
NCBI-ProteinID:
XP_048594359
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Position
A8:426344..435107
Genome browser
AA seq
1800 aa
AA seq
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MGKFEIIEEVEGDRVGTTDYYFDRIGEPLSIKEEDAQYDLENPPSQPLAISERRGLVFIA
HSSGFLVGRTKEVIAASKNSDGKGSRVCIQEIALVDVPVGDVRILSLSADDSILAASVDA
EIHFFSVDSLLNKDAKPSFSYSPDESGFVKDFRWTRKDKHSYLVLSSNGKLFHGTDSAPP
KHVMDGVDAVEWSSKGSYIAVAQDNSLRILSSKFNEKRCIALSFDSWIGDSDEDCVVKVD
SIKWVRQNCILLGCFQLIDGMEENYLVQVIRSPDGKITDGSSNLVALSFSDLFPCSMDDL
VPVGVGPHLLFSYVDQCKLAITANRKSIDEHIVLLNWSPGDDESAVSVVDIDRETFLPRI
GLQENGDDNMIMGLCVDMVSVEGTVNVRSGGDELKELPPFCVLACLTLEGKLVMYNVASV
SGLPDSSDVDLASSSDIEDAYAPSVGDDLPGQSSEESEQQRKFNFSVQNEQKHLNLENSV
SLLPTEQRFPKEEISKKETESVKSSVSGDNNVKQEPYAGKLLQAADGQQSMIPRQFGTSF
VQPPSSVGFETKNFAGFGHIFPVPDKPQKDISEQSKSMNFQTSFGSKSTPGLFAFSGPQN
ASVTPPQNTPAQLWSSGKGVSPPSFGSGLFPSVKDTQQKQPEQTETGYVNPPTCIREKPV
QAIETTRASALSIRTPPLGQSQDAGEGVEKIDPLPSIRASHLSLQVKSSFEKSSNHQQHK
TPLNAGPLRLEHAMSKQPSNINEMAREMDTLLQSIEGPGGFKDSCTSLLTGHIEELEQGL
EILAGKCQTCKSITHEQQGEIQHLLDKTIQVLAKKTYMEGMYKQTSDDQYWQLWNRRRLN
PELEAKRQHIVKLNKDLTHQLIELERYFNRLELDRYQDDGGLPLSRRGVPNRSAPSRRVQ
SLHSLHNTMSSQLAAAEQLSDCLSKQMTFLKIDSPVKKNVKQELFETIGIPYDASFNSPD
AVKANNASSAKNLLLSSIPASINAQSKQRQSSGTKSSDPETARRRRESLDRNWAAFEPPK
TTVKRMLLQEQQKSGTNQQIVSSERLRPKVDTQEQSLLRLKDHASPVVSSNKGIMKSFQQ
NTSEAQSTPFKSTRAMPQSNSPFNHSSASASKPSFNWSGSKSNSIASYAEESAPSQSKDT
KTPTVFEQTEKKAGGFKLPEGKANMFPDRSAGSVQRPTGAPVQSQFSFNTNSSMPGNRLT
FPAATVSASSSPLSSTSLDSVSTLPTPSSRSLPTSTKDSVSAPTSIPISLASVPQTLSGA
PTSTVSATGISVPFGKSLTSASLDLNQAATSTPSPSPGPTAGFSFKLPASSPSSPEIVSS
STGQSSVVPPSSTASQVSTSLVSATSSPTDSNRLFSSTSSSLTPPITSTAPGAFKFPQVS
TPSSAVSTAEPVSEPKKLETQSSSILSTGSTAEPVAKAATSQTELLPVKSEISTSETTVT
APVSTSGFLSGFSSATQSSPVSMAPPSFSWPGSSQPQQPSPTPVSFPTSFSTSASPLGEK
KDTVDTQEDEMDEEAPEASPAAELSMSGFGGFGLGSTPNPAAPKSNPFGGSFGNATTATS
NPFNMTVPSGELFRPASFSFQNPQPSQPTGFGGFSTTPSQTPTQGGFGQPSQVGVGQQAL
GSVLGSFGQSRQIGAGLPGATFGSPTGFGGSNPGSGLPVAPASGGFAAAGSSATGGFAAM
ASAGRGFAGASSSPTGGFAGLASGSGGFGGAAPGGGAGGGFGGLGSGSGGGGFGGVGSGS
GGFGSFAPPNSGGFAGASGGGGFGGFAGQGQGGGGGFSGFGGNTGGAGGKPSELFTQMRK
NT seq
5403 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaatttgagataatagaagaggtggaaggagatcgcgtcggaactacagattac
tacttcgacagaatcggcgaacctctctctatcaaggaagaagacgctcagtacgatctc
gaaaaccctccgtcgcagcctctcgccatctccgaacgccgcggcttagttttcatcgca
cattcctccgggtttctcgtgggaaggactaaggaagtgattgctgcttccaagaacagt
gacgggaaaggaagtagggtttgtatccaggagatagctcttgtggatgttcctgttggg
gacgttcgtatactgtctctctcagctgatgattcgattctcgcggcctctgtcgatgct
gagattcacttcttctctgtggattcacttcttaacaaggatgcaaagccttctttttct
tattcacctgacgagtcaggctttgttaaggattttcggtggacaaggaaagataaacat
tcttatcttgttctttctagcaatgggaagctctttcatggaactgatagtgcaccccct
aaacatgttatggatggtgttgacgcagttgaatggagttcgaaagggagttatattgct
gtggctcaagataatagcctgcgtattttgtcgtcaaagtttaacgagaagcgttgcata
gcactatcatttgactcatggattggtgactctgatgaagactgtgttgtgaaagttgat
tctatcaaatgggtacgccagaactgtattctgctcggatgctttcagctgattgatggc
atggaagaaaattacctcgttcaggttatcaggagtccagacgggaagattactgatggt
tcgtctaatctggttgctttatcattctctgatttgtttccatgttcaatggatgatctt
gttccggttggtgttggacctcatttactctttagctacgtagaccaatgcaaactggca
atcacagcaaacaggaagagcatagatgagcatattgttttgcttaattggtcacctggt
gatgatgaaagtgcagtttccgttgttgatattgaccgagagacctttttgccaaggatt
gggctccaagaaaatggagacgacaacatgatcatgggactctgtgtcgatatggtttct
gttgaggggaccgttaatgtccgttccggaggtgatgaactgaaagaactccctccattt
tgtgttctcgcatgcctcactttggaaggaaagctggtcatgtataatgttgctagtgtt
tcaggactcccagattcatctgatgttgatttggcttcttcttctgatatagaagatgct
tatgccccttcagttggagatgatcttcctggacaatcttcggaagagtctgaacaacaa
cgaaaatttaatttttcggtacaaaatgaacagaaacaccttaacttagagaattcagtt
tctctgttgcctaccgaacaaaggttcccaaaggaagaaatttctaagaaggaaactgag
tctgtaaaaagttcagtgtctggggacaacaacgtgaaacaagaaccctatgctggaaaa
ttattacaagccgcagatggtcaacaaagcatgattcctcggcagttcggaacaagtttt
gtacaacctccttcgtccgtaggatttgaaaccaaaaattttgcaggattcggtcatatc
ttccctgttcctgataaacctcagaaagatatatcggagcagtctaagtctatgaatttt
cagaccagttttgggtcaaagagtacaccaggcttatttgcattttccggcccgcagaac
gctagtgttacgccaccacaaaatacaccagcgcagctatggtcaagtgggaaaggcgtc
tcccctccaagttttggctccggtctgtttccatcagtgaaagatactcagcaaaagcaa
cctgaacagaccgaaactggttatgtgaatcctcctacgtgcatcagagagaagcctgta
caagctattgagactactagagcatcagcgttgagcattcgaactcctccgctaggccaa
agtcaggacgctggtgaaggggtagaaaaaatcgatcccctaccgtctatccgtgcctct
cacctgtcactacaagtgaaatcttccttcgaaaagtcctctaatcatcagcagcacaaa
actccgctcaatgctggacctctgagacttgagcatgccatgtcaaagcaacccagtaat
ataaatgagatggccagagaaatggatacccttttacagtccattgaaggaccaggtggt
ttcaaggattcttgcacctcattacttacaggtcatattgaagaattggagcaaggactt
gaaattcttgctggcaagtgccaaacgtgcaagagcataactcacgaacagcaaggagag
atccaacatcttctggacaaaacaattcaagttttggcaaaaaagacatacatggaaggc
atgtataagcaaacttctgatgaccagtattggcaactttggaaccgccggaggctgaat
cctgagcttgaagccaaacggcagcatattgtgaaactaaacaaggatttgactcatcaa
ctgattgaactagagagatactttaatcggcttgaactggatcgctaccaagatgatgga
ggacttcctctgtcccgaagaggtgtgccaaataggtctgctccttcaagacgtgtgcaa
tcccttcatagccttcataacacaatgagttcccaattggcagctgctgagcaactctct
gactgtctctcaaaacaaatgacctttttgaaaattgattcacctgtcaaaaagaatgtg
aagcaggagttgtttgagacaatcgggatcccttatgatgcttcattcaactcgccagat
gctgtaaaagccaacaatgcatcgtcagctaaaaacctattactctcttcgattcctgca
agtataaatgcacagtcaaaacaacgccagtcatctggtacgaaaagttccgaccctgaa
actgccaggaggaggagagaatcattagacaggaactgggctgcttttgagcctccgaaa
acaactgttaaaaggatgcttctgcaggagcaacagaagtcgggtacgaaccaacagatt
gtgtcgagtgagagattacggcctaaggttgatacacaagagcaatcactgcttcgcctg
aaggatcatgcatcacctgtagtctcctccaataagggaataatgaaatcattccaacaa
aacacatctgaagctcaatcaaccccgttcaaatcaacgcgagctatgccacaatctaac
agtccctttaaccactcttcagcatctgcatcaaagccaagcttcaattggtctggaagt
aagtcgaacagtatagcttcttatgctgaggaatctgctccgtcgcagagtaaggataca
aagacaccgactgtatttgaacagacagaaaagaaggctggaggatttaaacttcctgaa
ggcaaggcaaatatgtttcctgatagatctgctggaagtgtgcagcggcctactggtgca
cctgtgcaatcacagtttagtttcaataccaatagcagtatgcctggtaatagattaact
tttcctgctgcaacggtatcagcttcttcttcacctttgtctagcacgtcacttgattcc
gtttccaccttacctacaccgtcatcacgttcattgccaacctctacgaaagattcagtt
tcagctccaacatctattcccatcagcttggcatcagtcccacaaacactttcaggcgca
ccgacatctacagtttcagctacggggatcagtgttccatttggtaaatcgttgaccagt
gccagtttagatctcaatcaagcagctacgtcaacaccttctccatcacctggccctaca
gctggtttctcttttaagttaccagcttcttctccatcatcccctgaaattgtctcatct
tcaacaggccaatcttcggttgttccaccatcttcgacagcatcacaagtgtcaactagt
ctggtctcagcaaccagttccccaacagacagcaatcgtttgttttcatcaacctcttca
tctttaactccccctattacttctaccgctcctggcgcgtttaagtttcctcaagtttct
accccgtcgtctgctgtgtccactgcagagccagtctcagaacctaaaaaactagagact
caaagttcctcaattctaagtacgggaagtactgcagagcctgtagcaaaggcagcaaca
tcacagactgagctgctgccggtgaaaagtgaaatttcgacctcagagactacagtaaca
gcccctgtcagtacatctgggttcctttctggattttcatccgcaacacagtctagtcct
gtaagtatggcgcctccttcattcagttggcctggtagttctcagccgcaacagccatcg
ccaacacctgtctctttccctacatccttttcaacttcagcaagtccattgggtgagaaa
aaagacactgtagatacacaggaagatgaaatggacgaagaagctccagaggctagccct
gcggctgaacttagtatgagtggttttggaggttttgggcttgggtcaactccaaacccg
gctgctcccaaatcaaatccatttggtggttcctttggtaatgctacaacagcaacaagt
aatccgttcaatatgacagtccccagtggcgagctattccgacctgcatcattcagtttt
caaaatcctcaaccatctcaaccgacaggatttggcgggttttctacaacgccttctcaa
actcccactcagggcggatttggccaaccgtcgcaggttggcgtaggacagcaagcacta
ggatcggtactgggttcatttgggcagtcgaggcagattggtgctggtctcccaggagct
acgtttggttctcctaccggatttggtggctctaacccaggaagcggcctcccagttgca
ccagcatctggtggttttgctgctgctgggtctagtgccactggtggatttgccgccatg
gcttcggctggtaggggattcgcaggtgcttcttctagtccaactggtggattcgctggc
ttagcctcaggtagtggtggtttcggcggtgctgctccaggaggaggagctggtggtgga
tttggtggacttggttcaggatcgggtggtggtggatttggtggagttggttcaggctcg
ggagggtttggaagctttgctcctcctaatagtggaggttttgctggagcatcaggaggt
ggtggttttgggggtttcgctggccaagggcaaggcggtggtggtgggttctcagggttt
ggtgggaacacgggaggagcaggaggaaagccatcggaactcttcacacagatgagaaaa
tga
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