Brassica napus (rape): 106369910
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Entry
106369910 CDS
T04128
Name
(RefSeq) trafficking protein particle complex subunit 8-like isoform X1
KO
K20305
trafficking protein particle complex subunit 8
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bna04131
]
106369910
Membrane trafficking [BR:
bna04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
106369910
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAPPC-Trs85
TRAPPC9-Trs120
SNAP
Motif
Other DBs
NCBI-GeneID:
106369910
NCBI-ProteinID:
XP_048625072
LinkDB
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Position
C9:57263996..57272178
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AA seq
1276 aa
AA seq
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MVEPVNSSLGKMLLEEVSPVVMVLCTPLVEETFLKNGLSFVETLKPFCNFSNIDVPVRTS
GDQLYRLKKFTLRLFNAADIRQPNVEVAKQRLEHVITQAGEKVFHDLESDPPQITDILSN
SESEIAPTWFQYYNKELIRTLSFSDHEAFDHPVACLLVVSSKDEDPLNKFVDLFNTNRLP
SLLNDGVMDPKILKHFLLVHDNQDATTERLTSKVLSEMRSTFGNNECNLLCTNSSKEGNV
EHQANPWASFKSSVPAEKLGCALTGDDIGEIKELMQEFASRHIIPYMEQKVRDLNQQISA
TRKGLRNQIKNLWWRKGKDDIPDSTKGSIYTFSSTESQIRILGDYAFMLHDYELALSSYR
LISTDYKLDKAWKHYAGVQEMMGLAYFISDQSIKEAEYCMENASSTYMKLGKSGFQNATR
CGLWWAEMLKARDQYKEAASVYFRICGEEPLHAAVMLEQASYCFVLTKPAMLHKYGFHLV
LSGDHYKICDQVNHAIRTYRSAISVYESTTWSHIKDHVYFHIGQWYAIVGMNDVAVRNML
RVLDCGNQSKSTQEIFLRDFFDIVKKTGMKHEVVGLRLPIISMSSLQVIYEDHRTYASQA
SALVEESIWQSLEDDIIPSLNSGKSNWLELQSKLLPKKYKESNVCVVGESVKLDMEFRNP
LLISTSVTSVSLICELTENSDDLKLVEKETSSLSLGTEHNQVTTSGFSSFTLSEVDFTLG
GGEKKLVRLTVTPSEEGILKIVGVRWELSGSIVGVHYFQSVPTKAKTNKAKRKNKLTPTD
ALKFLVIKSLPRLEGSVDHLPDKLYAGDLRYLVLELKNNSESPIKNLKMKISHPRFVNPE
SHEEELTPGFPDCLKKGPEQNTVQRETSRTSVFAFPKDVSLQGDRSLRWPLWLRAAIPGT
ISLYFTIYYEMENVSSIMKYRTLRMHYSLQVLPSLETSFEITPSPSRLQEFLVRMDIVNR
ANSDSFEIHQLSTVGCRWGISLLQPVDTILPSKSILPGQGLSCFFMIKDCRKPGTEEEKT
TSILPSQTDIKLITQDDDEKLFDIVNSPLASFHESERSCHGTSDQLSPNTVDFILISRLA
KSSNPSAEQDLPKILSHHSCHNRIRSSIPLSWSLDGPKTMYHDFSTSFCEIKLKMVIRNT
SDGFLSVSINTIDGLPDAAAPTPSSGNLSGWRYVPAITEEMKLTSDVMGSRLGKPPPSME
SSPPFIWSGSSSTKVQIQPLSRTEIPLQISVFSPGVYNLCSYTLTWELSEHENALSSTSS
GICQGYPCYLTVLQSE
NT seq
3831 nt
NT seq
+upstream
nt +downstream
nt
atggtggagccggtgaactcttcgcttgggaaaatgctattggaggaggttagtcctgta
gtcatggttctctgcacgcctctcgttgaagagactttcctcaagaatggactatccttt
gtggaaacgctcaagccgttctgcaacttcagtaacatcgatgttcctgttcggacctca
ggcgatcagctttatcggctaaagaaatttacgctgagattgtttaatgcagctgatatc
agacaaccaaacgtagaggttgcaaagcaacggctagaacatgttattactcaagctggg
gagaaggtttttcacgatttggaatctgatcctcctcaaattactgatatactctctaat
tcagagtctgaaattgcacccacatggtttcagtattacaataaagaacttatccgcacc
ttgtcattttcagaccatgaagcttttgatcatcctgtggcttgtctcttggtcgtttca
tcaaaagacgaagaccctttaaataaatttgtagatcttttcaacaccaatagattacct
tctctgcttaatgatggtgtaatggacccaaagattttgaagcatttcctattggtgcat
gacaatcaagatgcaacaacagagaggttaacgtctaaagttctgtctgagatgagaagt
acatttggaaacaatgaatgcaacttactttgcactaattcatctaaagaggggaacgta
gaacaccaggctaatccatgggcttcatttaaatcaagtgtcccggctgaaaaacttgga
tgtgctcttactggcgacgatattggggagatcaaagagctgatgcaagagtttgcttcc
aggcatataattccgtacatggagcagaaagtccgagatcttaatcaacagatttctgca
acaaggaaaggactcagaaaccagataaagaacttgtggtggagaaaaggaaaagacgat
attccggattcaaccaaaggttctatctatacctttagctccaccgaatctcaaatcaga
attttgggtgactacgccttcatgttgcatgactatgaacttgcattgtctagctatcgc
ttaatatcaactgattacaagctcgataaagcttggaagcactatgccggtgtccaggaa
atgatgggactcgcatatttcatctcagaccagtcaataaaggaagctgagtactgcatg
gaaaatgcatccagcacttatatgaaacttgggaagtctggctttcaaaatgctacgaga
tgtgggctctggtgggcagagatgctaaaggctagagaccagtataaagaagcggcttct
gtttacttccgcatatgtggagaggaaccattgcacgctgctgttatgttagagcaagct
tcttactgcttcgtgttaactaagccagcgatgctacacaagtatggatttcatctagtt
ctctcaggagaccactataaaatctgtgatcaggttaaccatgcaattcgtacatataga
agcgcgatctctgtttatgaatcaactacttggagccatatcaaagaccatgtttacttt
catattggacagtggtatgcaattgtcgggatgaatgatgttgcagttagaaacatgctc
agagtactggactgtggaaaccagtccaagtctacccaagagatttttctcagagacttt
ttcgacatagttaagaaaactgggatgaagcatgaagtggtgggacttcgactaccaatt
attagcatgtcgtctcttcaagttatatatgaagaccatcgcacttatgcatctcaagct
tctgctcttgtagaagagagcatctggcaatcattggaggatgatatcattccatcgttg
aattctggcaagtcaaactggctggagttacagtcaaagctactgcctaagaaatacaag
gaatcaaatgtttgtgtcgttggagagtcagtgaaattggatatggagtttaggaatcca
ctgctaatctctacttccgttacaagcgtctctctcatctgtgaacttaccgaaaattct
gatgacttaaaattggtagaaaaagagacaagtagcttaagcttggggaccgaacacaat
caggttacaacctctggtttctcttctttcaccttgtctgaagtggacttcacattaggc
ggaggcgagaaaaagttggtgaggctcacggtcacccccagtgaagaaggtatcctcaaa
attgtcggtgtaaggtgggagttgtctggctccattgtaggcgtgcattacttccaatct
gtgcctacaaaggcaaaaactaacaaggcaaaaaggaaaaacaaacttactcccactgat
gccttgaaatttttagtcatcaagagtctacccaggcttgagggttcagttgatcatctg
cctgacaaattgtatgctggagatcttcgttatcttgttttagagttaaaaaataattca
gaatctccaataaagaatcttaaaatgaagattagccatccaagatttgtaaatcctgaa
agtcatgaagaagagctgacacccggatttccagattgcttaaagaagggccctgaacaa
aatactgtccagcgtgaaacaagtagaactagtgtatttgcatttccaaaggatgtatca
ctacaaggagaccgatctttgaggtggcctctttggcttcgagctgccatccctggaacg
atatctttgtatttcacaatatactatgagatggaaaatgtatcaagcatcatgaaatat
cgcaccctaaggatgcattatagtttacaggttttaccatctctagagacctcgtttgaa
atcaccccctctccatcaagattgcaagaatttcttgtgcgtatggatatcgtgaaccgt
gcgaattcagattctttcgaaattcatcagttgtcaacagttgggtgtcggtggggtatc
tcgttgcttcagcctgttgatacaatcttgccttccaagtctatactccctgggcaaggt
ttatcatgtttcttcatgattaaggattgcagaaaacccgggactgaagaagagaaaacc
acgtctattcttcccagccaaaccgacataaaactgattactcaggatgacgatgaaaag
ctttttgatattgttaactcacctttagcaagcttccatgaaagtgaaaggtcatgtcac
ggaacctcagatcagttaagtccgaataccgttgacttcattctcatctcgcgcctagca
aaatctagcaatccatcagcagagcaagatttaccgaagattctgtctcaccattcatgt
cacaatagaataaggagctcaatcccgctctcatggtcactagacggtccgaagaccatg
taccacgatttctcgacctccttttgtgaaattaaactaaagatggtaatcagaaacaca
tctgatggatttttatctgtgagcatcaacaccattgatggcctaccggatgcagcagca
ccaactccttcctctggaaacctgtccgggtggcgctacgtaccagccataacagaggaa
atgaaactaacttcagacgtcatgggaagccgcctgggcaaaccaccaccttccatggaa
agctcgcctcctttcatatggtcaggttcaagttccacaaaggtccagatccagccattg
tccagaacagagatccccctgcagatatcggttttctctccaggtgtctacaatctatgt
tcatatacacttacatgggagctttccgaacatgaaaacgcattgtcatcaacatcatca
gggatatgccaaggctatccttgttaccttactgttcttcagtctgagtga
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integrated database retrieval system
