Brassica napus (rape): 106371232
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Entry
106371232 CDS
T04128
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 32
KO
K14776
ATP-dependent RNA helicase DDX10/DBP4 [EC:
5.6.2.7
]
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bna03009
]
106371232
Enzymes [BR:
bna01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
106371232
Ribosome biogenesis [BR:
bna03009
]
Eukaryotic type
90S particles
Helicases
106371232
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF4217
ResIII
DASH_Spc19
Motif
Other DBs
NCBI-GeneID:
106371232
NCBI-ProteinID:
XP_013666728
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All DBs
Position
A10:complement(9822855..9826114)
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AA seq
744 aa
AA seq
DB search
MGRPKKTRGMKKQMRLDEAEEVIFLEQWIESQKPDSGSNPLALGPLPKDAKIGKLEDGEN
GAVFSRYAGVRRFDQLPISDKTKRGLKEAKFVEMVDIQRAALPHALCGRDILGAARTGSG
KTLAFVIPVLEKLHKERWGPEDGVGCIIISPTRELAAQTFSVLNKVGKFHKFSAGLLIGG
REGVDVEKERVNHMNVLVCAPGRLLQHMDETPNFECSNLKILILDEADRVLDSAFKGQLD
PIISQLPKRRQTLLFSATQTKKVKDLARLSLRDPEYISVHAESVTATPTTLTQTVIIVPV
EKKLDMLWSFIKSHLNYRILVFLSTKKQVKFVHEAFNKLRPGIPLKSLHGKMSQEKRMGV
YSQFIERQSVLFCTDVLARGLDFDKLVDWVVQVDCPEDVASYIHRVGRTARFNASGKSLL
FLTPSEEKMVERLQEARIPVKVTKANSDKLQEVSRLLASLLVNFPDLQTVAQRAFITYLR
SIHKRRDKEIFDVTKLSIEDFSASLGLPFTPRIRFANLKTKKKGVFERSIALEPENDDED
NVVAPTRVVKKDLLGEDLEEEDFPLRPNEEGKGVEKSNKDEGVPMPGTRVSKNKKLKISQ
HRPSGSRVKFDEEGNPVAPLAIVAATTETEVALDEEARKDYYKKLGEQLRKVDHEDKKVE
REKRREKRMKEKIKRKQGEMEEEEEEEGSASSEEETGQKRKRAKKMYFDDNGDGDEEKEG
GKINTDAISIAELEEMALKLITQS
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atgggaagacctaagaagaccaggggaatgaagaagcagatgcgcctcgacgaagccgaa
gaagtcatcttcctcgaacagtggatcgaatcccaaaaacccgattcaggatccaacccg
ctcgctctgggccctctcccgaaagacgccaagatcggaaagctcgaagacggcgaaaac
ggcgccgttttctcgcgctacgccggcgtaaggaggttcgatcagctgcccatatcggac
aaaacgaaacgagggctgaaagaggccaagttcgttgagatggtcgatatccagagagcc
gctctgcctcacgctttatgcggcagagatattctcggcgcggcgaggaccgggtcgggg
aaaactctcgcctttgttattccggtgctggagaagctgcacaaggagagatggggtcct
gaagatggagttgggtgtattatcatatctccgactagggaattagctgctcagactttc
agtgtgttgaataaagttggcaagtttcataagttcagtgctgggctcttgattggtggt
cgtgaaggagttgatgttgagaaggagagggttaatcatatgaatgttttggtgtgtgct
cccggtaggcttctccagcatatggatgagactccaaacttcgagtgttccaatctcaag
attctgattttagatgaggccgaccgtgttcttgattctgcatttaaggggcagttggat
cctatcatctcgcagttgcctaagcgcaggcaaactctgctattctctgcgacccaaacg
aagaaagtcaaggatctagcaaggctcagtctgagagatcctgagtacatcagtgtacat
gcagagtctgttacagctacccctactaccttgacgcagactgtaataattgtcccagtt
gaaaagaaactagacatgttatggagcttcatcaaatctcatcttaattacaggattctt
gtttttctatccaccaagaaacaggtcaaatttgttcatgaagcgttcaacaagctccgg
cctggaatacctttgaagagccttcacggaaaaatgagccaagagaaaaggatgggcgtg
tactctcagttcattgagagacaatctgttctcttctgtaccgatgttcttgccagaggt
cttgattttgacaagcttgtggactgggttgttcaggtggattgtcctgaagatgtagct
tcttatattcaccgagttgggcgtacagctcgtttcaatgcttcagggaagtcactcctc
tttctaacgccttctgaggaaaaaatggttgagagattacaagaagctagaattcctgta
aaagtcaccaaggcaaacagtgacaagttgcaggaggtttctagactcttggcttctttg
ttagtcaattttccagatcttcaaactgttgctcagagagccttcatcacatatctgagg
tccattcacaaaagaagagataaggagattttcgacgtgacgaagctgtccattgaggac
ttctctgcttcacttggtcttccatttactcctagaatccgattcgcaaaccttaaaacg
aagaagaaaggagtgtttgagagatcaatcgctcttgaaccggagaatgatgatgaggat
aatgttgtagcacctactcgggttgtgaagaaggatcttctaggtgaagatttagaggaa
gaggattttcctctgagaccaaatgaagagggaaagggagtagaaaaatcaaacaaggac
gaaggagttcccatgccaggaactcgggtttcgaaaaacaagaagctgaagatcagccag
cacagaccaagtgggtccagggtcaagtttgatgaggaaggcaatccagtggctcccttg
gcaatagtagctgccacaactgagactgaagttgcccttgatgaagaggcaaggaaggat
tactataagaaactgggggagcaactgaggaaagtggatcatgaggacaagaaagtggag
agggaaaagaggagggagaagagaatgaaagaaaagattaagaggaagcaaggagagatg
gaggaggaggaagaagaagaaggctctgcatcatcagaagaagaaacaggacaaaaacgc
aaaagagcgaagaagatgtactttgatgataatggtgatggagatgaagaaaaggaagga
ggaaaaatcaacacagatgccatctccatagctgagcttgaggagatggctctcaaactg
ataacgcagtcgtga
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