Brassica napus (rape): 106375472
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Entry
106375472 CDS
T04128
Name
(RefSeq) ubiquitin C-terminal hydrolase 12-like isoform X1
KO
K11838
ubiquitin carboxyl-terminal hydrolase 7 [EC:
3.4.19.12
]
Organism
bna
Brassica napus (rape)
Pathway
bna03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
106375472
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
bna01002
]
106375472
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bna04121
]
106375472
Enzymes [BR:
bna01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
106375472
Peptidases and inhibitors [BR:
bna01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
106375472
Ubiquitin system [BR:
bna04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
106375472
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP7_ICP0_bdg
UCH
USP7_C2
MATH
UCH_1
RA
ubiquitin
SASP
Malt_amylase_C
Motif
Other DBs
NCBI-GeneID:
106375472
NCBI-ProteinID:
XP_013670840
LinkDB
All DBs
Position
C9:62346254..62354954
Genome browser
AA seq
1120 aa
AA seq
DB search
MTILTPPPGDVVRLQQEDEEMLVPHSDLVDGTAQPMEVSETEAAVSTVENQQPAEDPPTL
KFTWTVPNFSRQNTRKHYSEVFVVGGYKWRILIFPKGNNVDHLSMYLDVADAATLPYGWS
RYSQFSLAVVNQIHTRYTIRKETQHQFNARESDWGFTSFMPLSELYDPSRGYLVNDTVYV
EAEVAVRKVLDYWSYDSKKETGFVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTEN
DAPTASIPLALQSLFYKLQYNDTSVATKELTKSFGWDTYDSFMQHDVQELNRVLSEKLED
KMKGTVVEGTIQQLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCKDVYASFDKYVE
VERLEGDNKYHAEEHGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPL
ELDLDRENGKYLSPDADKSVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWYKFDDER
VTKEDLKRALEEQYGGEEELPQTNPGFNNPPFKFTKYSNAYMLVYIRESDKDKIICNVDE
KDIAEHLRIRLKKEQEEKEEKRKYKAQAHLFTIIKVARDQDLKEQIGKDIYFDLVDHDKV
RSFRIQKQTPFQQFKEEVAKEFGVPVQLQRFWIWAKRQNHTYRPNRPLTPQEELQPVGQI
REASNKANTAELKLFLEVELLVERPIPPPDKSKEDILLFFKLYDPEKQELRYVGRLMVKS
SSKPMDITGKLNEMAGFAPGEEIELFEEIKFEPCVMCEHLDKKTSFKLCQIEDGDIICFQ
KPFGNKDTECRYPAVPSFLEYVQNRQLVRFRALEKPKEDEFVLELSKLHTYDDVVERVAE
KLGLDDPSKLRLTSHNCYSQQPKPQPIKYRGVDHLSDMLVHYNQTSDILYYEVLDIPLPE
LQGLKTLKVAFHHATKEEVVIHNIRLPKQSTVGDVINELKTKVELSHPDAELRILEVFYH
KIYKIFPLTERIENINDQYWTLRAEEIPEEEKNIGPNDRLILVYHFAKETGQNQVVQNFG
EPFFLVIHEGETLEEIKNRIQKKLHVSDEDFAKWKFAFMSMGRPEYLQDSDVVYNRFQRR
DVYGAFEQYLGLEHTDTSPKRAYSANQNRHTYEKPVKIYN
NT seq
3363 nt
NT seq
+upstream
nt +downstream
nt
atgactatactgactccgcctcccggtgatgtggtgcgactgcagcaggaggatgaggag
atgcttgtgccgcattcagatttggttgacggcactgctcagcccatggaggtttcggaa
actgaggctgctgtgagtactgtggagaaccagcagccagctgaggatcctcctactctg
aaattcacgtggactgtcccaaacttttctaggcagaacaccaggaagcattactctgaa
gtatttgtcgttggaggatacaaatggcgcatattaattttcccgaaagggaacaatgtc
gaccatttgtccatgtacttagatgttgctgatgctgcgactttgccttacggctggagc
cgatactctcagttcagtctggctgtggtcaatcaaatccacaccagatataccattaga
aaagaaacgcaacatcaattcaatgcaagagaaagcgattggggatttacatcattcatg
cctctcagcgaactttatgatcctagtagaggctatttagtgaatgatactgtttacgtt
gaagctgaagtcgctgtacgtaaggttcttgattactggtcatacgactctaagaaagag
actggttttgttggtctcaagaaccaaggtgcaacttgttacatgaattctctcctacag
acactataccacataccttacttcagaaaggctgtataccatatgccgacaactgagaac
gacgcgcccacagcaagtatacctttggctctccaaagtttgttttacaagctccagtat
aacgacactagtgttgctactaaagagctgacaaagtcgtttggttgggatacatatgat
tctttcatgcaacatgatgtccaagaactcaatcgagttctcagcgaaaaacttgaggac
aagatgaagggaactgttgtggagggaacaatacaacagctatttgagggtcaccatatg
aattacattgagtgcataaatgtagattacaaatctacacggaaagaatcattttatgac
cttcagctggatgttaaaggctgcaaggatgtttatgcttcttttgacaaatatgttgaa
gttgaacgccttgaaggagacaacaaatatcatgcagaagaacatggtttacaggatgca
aaaaaaggcgttcttttcatcgactttccaccggttcttcagctccagctcaagaggttt
gaatatgacttcatgagggacaccatggtgaagataaatgatcggtatgaattccctctt
gaactggatcttgatagagagaatggaaagtatttatcccctgatgctgacaagagtgtc
cgcaacctttacacgcttcacagtgtgttagttcatagtggaggagtacatggtgggcac
tattacgcttttataaggccgacgctctctgatcaatggtataaatttgatgatgaacga
gtaactaaagaagatttgaaaagggcattggaggagcaatatggtggtgaagaagagcta
ccacaaactaatcctggtttcaataaccctcctttcaaattcacaaagtactcgaatgca
tacatgcttgtatatatccgggaaagtgacaaagacaaaattatctgcaacgttgatgag
aaagacattgctgaacatttaaggataaggctgaagaaagaacaggaagaaaaggaagaa
aaaagaaaatacaaggcacaagctcacctatttaccataattaaggttgcaagggatcaa
gaccttaaggaacaaattgggaaagatatatattttgatcttgtcgatcatgacaaagtt
cgtagtttccggattcagaaacagacaccatttcaacaatttaaggaggaagtggccaaa
gaatttggtgtacctgttcagctacagaggttctggatttgggcaaagcgacaaaaccat
acctatcgtcccaatcgcccccttactcctcaggaggaattgcaaccggttggacaaata
agagaagcatctaacaaggcaaacactgcagaacttaagctgtttttggaagtagagtta
ctggttgaacgtcctattcctcctcctgacaaatcaaaagaagatattcttcttttcttt
aagctttatgaccccgagaagcaagagttaaggtatgttggtagactgatggtgaaaagt
tccagtaagcctatggatataactggaaaactgaatgaaatggctggctttgctcctggt
gaagaaatagaactatttgaggaaatcaagtttgagccatgtgtaatgtgcgaacacctg
gataagaaaacttcattcaaactatgtcaaatcgaagatggagatatcatttgctttcag
aaaccttttggtaacaaggatactgagtgccgctacccagctgtgccttcatttcttgaa
tatgtccagaatcgacagctggtccgatttcgtgctctggaaaaacctaaagaagatgaa
tttgttttggagttgtcaaagttgcacacttatgacgatgtcgtggaaagagtggccgag
aagcttggtcttgacgatccatccaagcttaggcttacatctcacaattgctattcccag
caacccaagcctcagcctatcaaataccgtggggtagaccatttgtcagatatgttagtt
cactacaatcagacgtctgatattttgtattatgaagttctggacattcctcttccagaa
ttgcaaggtcttaaaaccttaaaagttgctttccatcatgccacgaaggaagaggtggta
atccacaatatcagactacctaaacaaagtacagtcggagatgttatcaatgaacttaaa
acaaaggtggagctttcgcatccagatgcagaactgagaatacttgaggtgttttaccac
aagatctacaagattttcccattaactgaaagaattgagaatataaacgaccagtactgg
actttgcgagctgaggagattcctgaagaagagaaaaatattggtccaaatgatcgctta
attctagtgtaccactttgctaaggagactggacaaaatcaggtagtgcaaaacttcggg
gagccgttcttcttggtaatccatgaaggtgaaactcttgaagaaatcaagaaccgtatc
caaaagaagcttcatgtatctgatgaggactttgccaagtggaagtttgcgtttatgtca
atggggcgtccggagtacttgcaggactcggatgttgtttacaatcgctttcagagaagg
gatgtctacggtgcctttgagcagtaccttgggttggagcacactgataccagtcctaag
agggcttactctgcaaaccagaaccgacacacttatgagaagccggtgaaaatatacaat
tag
DBGET
integrated database retrieval system
