Brassica napus (rape): 106381585
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Entry
106381585 CDS
T04128
Name
(RefSeq) transcription initiation factor IIF subunit alpha
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
bna
Brassica napus (rape)
Pathway
bna03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
106381585
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bna03021
]
106381585
Transcription machinery [BR:
bna03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
106381585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_alpha
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
106381585
NCBI-ProteinID:
XP_048624273
LinkDB
All DBs
Position
C9:27644439..27646963
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AA seq
556 aa
AA seq
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MTDLNPYIRWLYPLFLYSPERQNLSPFSETQILIAISDPKKGKKTTPWIGSKMSHCLILK
PACMGCGSRSDLYGSSCRHMTLCLKCGKTMAENKAKCLDCGTVLTRLIREYNVRAATPTD
KNYFIGRFASGLPNLKKGSDENKWSLRKDIPQGRQFTDAQREKLKKKPWILEDETGQFQY
QGQLEGSQSATYYLLVMQNKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKMDNRRKTADG
YQRWMMKGGESDKEAGGSSGRGRKKSSGGEEEEEGNVSDRGEEDEEEEASRKSRLGLNKK
SNDDDEEGPRGGDLDMDDDDDIEKGDDWEHEDIFTDDDEAVDIDPEEREDLLAPEMPAPP
EITQDEEEEGELSTSGKELKKLLGKSNGLNESDEDEDDDEETNFSISKQKDATKEVHIES
SPPPKQPAQPSSSAKPSKGKRKLNDVDSKKPSTSSSSAQKKVKAENEEKSNSVSRSNATA
VKAEPTPASATGPVTEDEIRAVLMEKKQVTTQDLVNGFKPRLKTREDKNAFADILKKISK
IQKNAGSQSVVVLRGI
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atgacggatctgaatccctatataagatggttgtatcccctcttcttgtattctccagag
agacaaaatctttctcctttctctgaaacacaaattctaattgcaatctcggacccgaag
aaaggcaagaaaacaactccttggatcggatcaaaaatgtcgcactgtttaatcctaaag
ccggcgtgcatgggctgtggatcacggtccgatctctacggaagctcgtgcaggcacatg
acgttgtgtctaaagtgtggcaaaaccatggctgagaacaaagccaagtgtctcgactgt
ggaaccgtcctcaccagattgattcgggagtataacgtccgtgcggctacacccacggac
aagaactacttcattggtaggtttgcctctggtcttcccaatttaaagaagggctctgat
gagaataaatggtctcttcgtaaagacataccacaaggtcgtcagttcacagacgcacaa
cgggagaagttaaagaagaagccttggatcttggaagatgagactggtcagtttcagtac
caggggcaacttgaaggctcccagtctgcaacttactatctcttagtgatgcagaacaag
gagtttgtcgctattcccgctggttcttggtataacttcaacaaggttgcacagtataag
caacttacactggaagaagcggaggagaagatggataaccgtagaaaaacggctgatggg
tatcagaggtggatgatgaaaggcggtgagagtgacaaagaggcgggtggaagcagtggc
aggggtcgtaagaagtcatcaggaggcgaggaagaagaagaaggtaatgtctctgacaga
ggagaggaagacgaggaggaagaggcttcacggaagagtagactcggtcttaataaaaag
agtaatgatgatgatgaagaaggtccaaggggtggtgatcttgacatggatgatgatgat
gacattgagaaaggggatgattgggagcatgaagatattttcactgatgatgatgaggct
gttgatattgatcctgaggaacgtgaagatcttctggcacctgagatgcctgctcctcct
gaaataacgcaggatgaagaagaggagggagagttgagcacatctggtaaagagttgaag
aagttgcttggtaagtctaatggtttgaatgaatctgacgaagatgaagacgacgatgag
gagacaaacttcagtatttcgaaacagaaggatgcgaccaaagaagtacatattgagagc
agtcctcctccaaaacagccagcacaaccttcatcttctgcaaaaccatccaagggaaag
agaaaactgaatgatgtcgattctaaaaagcctagcaccagcagcagctctgctcagaag
aaagtgaaggctgaaaatgaagagaaaagcaactcggtttcaagatccaacgcaacagcc
gtgaaagctgaaccaactccagcttctgctacgggacctgtgaccgaagacgaaatccgc
gctgttctgatggagaagaagcaagtcactacacaggaccttgtcaacgggttcaagcca
agacttaagaccagagaggacaagaacgcttttgctgatattctgaagaagatctcaaag
attcagaagaatgctggttctcaaagcgtcgtcgttttgaggggaatatga
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